KEGG   Spiroplasma citri: SCITRI_00412
Entry
SCITRI_00412      CDS       T04628                                 
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase) component
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sck  Spiroplasma citri
Pathway
sck00010  Glycolysis / Gluconeogenesis
sck00020  Citrate cycle (TCA cycle)
sck00260  Glycine, serine and threonine metabolism
sck00280  Valine, leucine and isoleucine degradation
sck00620  Pyruvate metabolism
sck00630  Glyoxylate and dicarboxylate metabolism
sck00640  Propanoate metabolism
sck00670  One carbon pool by folate
sck00785  Lipoic acid metabolism
sck01100  Metabolic pathways
sck01110  Biosynthesis of secondary metabolites
sck01120  Microbial metabolism in diverse environments
sck01200  Carbon metabolism
sck01210  2-Oxocarboxylic acid metabolism
sck01240  Biosynthesis of cofactors
Module
sck_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:sck00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SCITRI_00412 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SCITRI_00412 (lpdA)
   00620 Pyruvate metabolism
    SCITRI_00412 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SCITRI_00412 (lpdA)
   00640 Propanoate metabolism
    SCITRI_00412 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SCITRI_00412 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SCITRI_00412 (lpdA)
   00310 Lysine degradation
    SCITRI_00412 (lpdA)
   00380 Tryptophan metabolism
    SCITRI_00412 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SCITRI_00412 (lpdA)
   00670 One carbon pool by folate
    SCITRI_00412 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sck04147]
    SCITRI_00412 (lpdA)
Enzymes [BR:sck01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SCITRI_00412 (lpdA)
Exosome [BR:sck04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SCITRI_00412 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA FAD_binding_2 HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_3 AlaDh_PNT_C Thi4 DAO 3HCDH_N GDI
Other DBs
NCBI-ProteinID: APE74317
UniProt: Q14PD6
LinkDB
Position
354445..355827
AA seq 460 aa
MENKYDVIIVGAGPGGYVTAIKAAQEGLKTLIIEKEYYGGVCLNVGCIPTKALLKSSKVY
DMMKHADNYGIDVAKAAVAPNWVKMQERKAKVVTQLTKGVEFLLKKNKVDLIKGEAKAID
KNTVEVAGKRYLCANLIIATGSVSRRLPLPAFEQAEKAGYVISSTEALSLPTIPKKLIII
GGGVIGIEFACLYHRLGTEVTILQGLDTILELLDKDIREELTKLLIKNKVKIETSVKIKA
IKGKSVIYDNSEGKEVKLTSDYCLVSVGRTPVTTGFENIGLKIGERKNIEVDEQCKTNLP
GVYAIGDVVGRAMLAHVAWAQGILVIDNIKGKNVKMNYNRIPSCIYSFPEVATVGITEEQ
AIKDKIAYKAFKFPLAANGKAIADGETDGFVKILCDPKYGEILGAHIVAATATDMISEIT
ACMETEGTIHELAKTVHPHPTLSEIIMEVSHGLEGRAIHI
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggaaaacaaatatgatgtaattattgttggagcaggcccaggtggctatgttacagcg
attaaagcagctcaagaaggtttaaaaacactaattattgaaaaggaatattatggtggt
gtttgcctaaatgttggttgtattccaacaaaagcgttgttaaaaagtagtaaagtatat
gatatgatgaaacatgctgacaactatggtattgatgttgcaaaagcagcagtcgcccca
aattgagtaaaaatgcaagaacgaaaagcaaaagtagtgacgcaattaacaaaaggggtt
gaatttttattgaaaaaaaataaagttgacctaattaaaggcgaagcgaaagcaattgac
aaaaataccgttgaagttgctgggaaacgttatttatgtgctaatttgattattgcaaca
ggaagtgtttcgcgtaggctaccattaccagcttttgaacaagctgaaaaagctggttat
gttatatcatcaacagaagctttatcattaccaacaattccaaaaaaattaattattatt
ggtggtggtgtcattggcattgaatttgcttgtttatatcatcgtttaggaacagaagta
acaattttacaaggtttagacactattttagagttattagataaagacattcgtgaagaa
ttaacaaaattgttaattaaaaataaggtaaaaattgaaacttcagttaagattaaagca
attaaaggtaaatcagtaatttatgataatagtgaaggaaaagaagtaaaactaacatca
gattattgtttagtttcagttggtcgaacaccagtaacaactggttttgaaaacattgga
ctaaaaattggagagcgaaaaaacattgaagttgatgagcaatgtaaaacaaacttgcct
ggtgtatatgcaattggcgatgttgtggggcgtgcaatgctagctcatgttgcttgagca
caaggaattttagtaattgataatatcaagggaaaaaatgtaaaaatgaattataataga
attccttcttgcatttattcattcccagaagtagcaacagttggaattactgaagagcag
gcaattaaagataaaattgcttataaagcatttaaatttccactagcagcaaatggtaaa
gcaatagctgacggagaaactgatggttttgttaaaattttatgtgatccaaaatatggt
gaaattttaggagctcatattgttgctgcaacagcaacagatatgatttctgaaattact
gcttgtatggaaacagaaggaacaattcatgaattggcaaaaacagttcacccacatccg
acgctatcagagattattatggaagtttcccatggtttagaaggccgtgcaattcatatt
taa

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