Spiroplasma citri: SCITRI_00474
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Entry
SCITRI_00474 CDS
T04628
Symbol
ffh
Name
(GenBank) signal recognition particle
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sck
Spiroplasma citri
Pathway
sck02024
Quorum sensing
sck03060
Protein export
sck03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCITRI_00474 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCITRI_00474 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCITRI_00474 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sck02044
]
SCITRI_00474 (ffh)
Enzymes [BR:
sck01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SCITRI_00474 (ffh)
Secretion system [BR:
sck02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCITRI_00474 (ffh)
Eukaryotic Sec-SRP protein
SCITRI_00474 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_17
CbiA
AAA_19
ResIII
cobW
MMR_HSR1
NB-ARC
Arf
AAA_33
6PF2K
GTP_EFTU
AAA_24
AAA_30
AAA_16
Lip_prot_lig_C
DUF4175
G-alpha
LPD5
Motif
Other DBs
NCBI-ProteinID:
APE74379
UniProt:
A0AAJ4JXU7
LinkDB
All DBs
Position
414656..416014
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AA seq
452 aa
AA seq
DB search
MIGDFLANRLKKSIEKNMKKSTLTTDAITETMREIRLSLLEADVNNEVVKDFIKAVETKA
RGEYILDGLNSTQMMVKIVHEELVNIFGKTAKELSFASKPTIIMMVGLQGSGKTTTTGKI
AKLVEKKYHKKPLLVACDIYRPAAIEQLKTIGKNLNIEVFERGMQNPITTAQQAITYAKD
NKNDVILIDTAGRLHIDAELMQELKEIKNNITPDEILLVVDGMTGQDIINVATEFNQLLK
LTGVIVTKLDGDARGGAALSITHLTKLPITFIGTGEGMSNLQIFYPDRMADRILGMGDVQ
TLVEKAKDVLDERDIKKTMNRMMMGQFDLQDLLNQMRQISKMGKMGGIMKLLPGMPKLSD
EKIADAERKLKITEVLLSSMTVKERREPRLLKHLSRKNRILKGSGRTEKEYNELINQFEK
TKKQVDEIARQIKSGRMPNIPGMGGLSGMGFN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattggagattttttagcgaatcgattgaaaaaatcaattgaaaaaaatatgaaaaaa
tcaactttaacaactgatgccattactgaaacaatgcgtgaaattcgattatcattatta
gaggcggatgtgaataatgaagtagttaaagattttattaaagctgttgaaactaaagct
cgtggtgaatatattcttgatggattaaattcaacacaaatgatggtaaaaattgtgcat
gaagaattagttaatatatttggaaaaacagccaaagaattatcgtttgcttcaaaacca
acaattataatgatggttggtttacaaggaagtggtaaaacaaccacaacggggaaaatt
gctaagttagttgaaaagaaatatcacaaaaaaccgttattagttgcttgtgatatttat
cgaccagcagcgattgaacaattaaaaacaattgggaaaaatttaaatattgaagttttt
gagcgcggaatgcaaaacccaataacaactgcgcaacaagcaattacttatgcaaaagac
aataaaaatgatgttatcttaattgatacagctggacgtttacacattgatgctgagtta
atgcaagaattaaaagaaattaaaaataatattaccccagatgaaattcttctagttgtt
gatggaatgacagggcaagacattattaatgttgcaactgaatttaatcagttattaaaa
ttaacaggagtaattgttacaaaattagatggtgatgctcgtggtggggctgctttgtca
attacacatttgacaaaattaccaattacttttatcggaaccggagaaggaatgagtaat
ttacaaatcttttatcctgatcgaatggctgatcgaattttaggaatgggagatgttcaa
accttagttgaaaaagcaaaagatgtgttagatgaacgtgatatcaaaaaaacaatgaat
cgaatgatgatgggacagtttgatttgcaagatttattaaaccaaatgcgtcaaatttca
aaaatgggtaaaatgggcggaattatgaaattgttacctggaatgccaaaactaagtgat
gaaaagattgctgatgctgaacgaaaattaaaaataactgaggtattgttatcatcaatg
acagtgaaagaacgccgtgaaccacggttattaaaacatttatcacgaaaaaatcgcatt
ttaaaaggctcaggacgaactgaaaaagaatataatgagttaattaatcaatttgagaaa
acaaaaaaacaagttgatgaaattgctcggcaaattaaatcagggcgtatgccaaatatt
cctggtatgggtggtttaagcggaatgggttttaattaa
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