Spiroplasma citri: SCITRI_00720
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Entry
SCITRI_00720 CDS
T04628
Symbol
nfo
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sck
Spiroplasma citri
Pathway
sck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCITRI_00720 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_00720 (nfo)
Enzymes [BR:
sck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SCITRI_00720 (nfo)
DNA repair and recombination proteins [BR:
sck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SCITRI_00720 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
APE74614
UniProt:
Q14M87
LinkDB
All DBs
Position
633846..634772
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AA seq
308 aa
AA seq
DB search
MKDYNLIIGSHVSMNKQQNYLLGALNESLNNNANAMMIYTGPPQNTIRVSTEQFFIPEFY
QQLKKHHFDINNIIIHAPYIINLANTTNPSTFEIAVEFLKNEITRADEIGIKTIVLHPGS
GVGAPEQVGLDQIIEGLNLVLTPNQKAKIALETMAGKGSELGTSFAQLKYIIDNVKLNDK
LGVCWDTCHMHDAGYRLTEALDDIIIEFEQLIGLNRLLCLHINDSKNPLNAHKDRHENIG
YGYLGFETLLKIIYHPKLDGMIKILETPYVGEKKHAVAPYKDEIAMIKAKNFTDPFQQKG
KIKIDLGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattataatttaattattgggagtcacgttagtatgaacaagcagcaaaattat
ttgctgggtgccttaaatgaaagtctaaataataatgctaatgcaatgatgatatataca
ggaccaccccaaaatactattcgtgttagtactgaacaattttttattccagaattttat
caacaattaaaaaaacatcattttgatattaataatattattattcatgctccttatatt
attaatttagcgaacacaactaatcctagtacttttgaaatagctgttgagtttttaaaa
aatgaaattactcgtgctgatgaaattggaattaaaacaattgttttacatcctggaagt
ggtgttggcgcgccagaacaagttggattagatcaaattattgaaggattaaatttagtt
ttaacacctaatcaaaaagcaaaaattgctttagaaacaatggctggtaaggggagcgaa
ttaggaacaagttttgcccaactaaaatatattattgataatgttaaattaaatgataaa
ttaggggtttgttgagatacttgtcatatgcatgatgctggttatcgcttgacagaagcg
ttagatgatattattatagagtttgagcaattaattggtttaaaccggttattatgttta
catattaatgacagtaaaaatcctttaaatgcccataaggatcgccacgaaaatattggc
tatggttacttggggtttgaaacccttttaaaaataatttatcatcctaaattagatggg
atgattaagattttagaaacaccatatgttggagaaaagaagcatgcggttgctccttat
aaggatgaaattgcaatgattaaggcaaaaaattttactgatccatttcaacaaaagggt
aaaataaaaatagatttaggagaataa
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