Spiroplasma citri: SCITRI_00840
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Entry
SCITRI_00840 CDS
T04628
Symbol
xseA
Name
(GenBank) putative exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sck
Spiroplasma citri
Pathway
sck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCITRI_00840 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_00840 (xseA)
Enzymes [BR:
sck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SCITRI_00840 (xseA)
DNA repair and recombination proteins [BR:
sck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SCITRI_00840 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
APE74732
UniProt:
A0AAJ4JYK0
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All DBs
Position
734913..736205
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AA seq
430 aa
AA seq
DB search
MSKNIYTVSEINYYLKTIIEQEPNLINISLQGEISNITNHSSGHVYFTIKDEKAQIRAIM
FAFNAKNLQFKLKEGLKIIATGSIKVYEPQGTYSLQVVALSLQGVGTLFLKYEALKQELS
KKGWFGQSLKKPIPRFPNNIGVITAPTGAAIRDIISTIHRRFPQANIYLFPSLVQGSEAK
HDIRAKIKAAQSFTPHLDTLIVGRGGGSIEDLWAFNELEVVEAIYQTTIPVISAVGHEID
FTLADFVSDLRAPTPTAAAELATPDQKELINYLQQQRRNLINFVKGRIDKIGDKLSELKN
SYVLTRPQALYTQYEHSYQLLLKQFNVLQETFFIANKNMIQNYYQTLVRTIKQQILAIEH
EKNNLVSKLDLLSPLKTLTRGYSITYNDNKNVISTTHDIKNNDIIITRVQDGFIHSIVQA
INKDGEKNDK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatatttatacggttagtgaaattaattattatttaaaaacaattattgaa
caagaaccaaatttaattaatatttctttacaaggagaaatttctaatattacaaatcat
tcatcaggacatgtttattttacaattaaagatgaaaaagcacaaattcgggcaattatg
tttgcatttaatgcaaaaaacttgcaatttaaattaaaagaaggcttaaaaattattgcg
acaggttctattaaggtatatgaaccgcaaggaacatatagtttacaagtagttgcttta
tctttacaaggggttggtactttatttttaaaatatgaagcattaaagcaagaattaagt
aaaaaaggttggtttggtcaatctttaaaaaaaccaattccacgttttccaaataatatt
ggggtaataacagctccaactggtgctgcaattcgtgatattatttctaccattcatcgc
cgttttccacaagcaaacatttatttatttccaagtttagtgcaaggaagtgaagcaaaa
catgatattcgagcaaaaattaaggcagcacaatcctttactccacaccttgatacatta
attgttggccgtggtggtggtagtattgaagatttatgagcttttaatgaactggaagtt
gttgaggcaatttatcaaacaactatcccagttatttcagctgttgggcatgaaattgat
tttaccttagctgattttgttagtgatttacgagcaccaacaccaacggcggcggctgaa
ttagcaacacctgatcaaaaagaattaattaattatttgcaacaacaacgacgtaattta
attaattttgttaaaggcagaattgacaagataggagataaactaagcgaattaaaaaat
agttatgttctaacaagaccacaagcattatatacacaatatgagcattcttatcaatta
ttattaaagcagtttaatgttttacaagaaacattctttatagcaaataaaaatatgatt
caaaattattatcaaacattggtaagaacaattaaacaacaaattttagcaattgaacat
gaaaaaaataatttagtaagcaaattagacttgttaagtcctttaaaaacattaactcgt
ggttatagtattacttataatgataataaaaatgtaatatcaacaacacatgatattaag
aataatgatataataataacacgtgtgcaagatggattcattcattcaatcgtacaagca
attaataaggatggtgaaaaaaatgacaaataa
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