Spiroplasma citri: SCITRI_00904
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Entry
SCITRI_00904 CDS
T04628
Symbol
phrB
Name
(GenBank) putative deoxyribodipyrimidine photolyase protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sck
Spiroplasma citri
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_00904 (phrB)
Enzymes [BR:
sck01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SCITRI_00904 (phrB)
DNA repair and recombination proteins [BR:
sck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SCITRI_00904 (phrB)
Prokaryotic type
SCITRI_00904 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APE74793
UniProt:
A0AAJ4EJD4
LinkDB
All DBs
Position
786923..788233
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AA seq
436 aa
AA seq
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MNIFIFHRDFRIEDNLGLAQLANEEKKIYLLFIFTKEQIKANNYFSSRSFQAMVHCLKQL
TKKVHVNFLKSENEQTGIKFLLEQGYKINKIYTNRDYTPFALNRSKAMRQLSKEYNFIYR
EFDDYVLLEPWTIKTTQNGYYTVFTPFWNKLKEHFNDNHIITYKVNPFLPQHLKDLEILQ
DITNVKSSDFNLPLEFEKVKTAMFQLNQNYQQTRDLVDLENGTAKISTALKFGVVSIRQC
YLWSIEKFGTFDNAFARQLAWRDFYYQVTYNAQLHQQWCFSENWNKKITINWTNNLEWFQ
KWQNGETGYDFIDAGMKELKETGLLHNRARMVCASFLVKNLQIDWHKGEEYFAQQLIDYD
PIINQCSWQWVAGTGFDAQPFFRIFNPELQQKKYDPTSSYCNKFLKNRLTINKIVDYKIS
VKKALEIYKDCTIKTV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttttatttttcatcgtgattttagaattgaagataatcttggtcttgcgcag
ttggctaatgaggaaaaaaaaatttatttattatttatttttacaaaagagcaaataaaa
gcgaataattatttttcatcccgtagttttcaagcaatggtccattgtttaaaacagtta
actaaaaaagttcatgttaattttttaaaaagtgaaaatgaacaaactggaattaaattt
ttgttagaacagggttataaaattaataagatatatactaaccgcgattatacaccattt
gctcttaaccggagtaaagcaatgcgccaattatcaaaagaatataattttatttatcgt
gaatttgatgattatgtattactagaaccgtgaacaataaaaactactcaaaatggatat
tacactgtttttacaccattttgaaataaattaaaagaacattttaacgataatcatatt
attacttataaggttaacccctttttgccgcaacatttaaaagatcttgagattttacaa
gacattacaaatgttaaatctagtgattttaatttaccattagaatttgaaaaagttaaa
acagcaatgtttcagttaaatcaaaactatcaacaaactcgtgatttggttgatttagaa
aatgggacagcaaaaattagtactgctttaaaatttggtgttgtttcaattcgccaatgt
tacctttgaagtattgaaaaatttggtacttttgataacgcttttgcacgacaattggca
tgacgagatttttattatcaagtaacttataatgctcaattacatcaacaatgatgtttt
agtgaaaattgaaataaaaaaataacaattaactgaacaaataatctagaatgatttcaa
aaatgacaaaatggtgaaactggctatgattttattgatgccggaatgaaagaattaaaa
gaaacaggtttattgcataatcgagcaagaatggtttgtgcttcttttttagttaaaaat
ttacaaattgattgacataaaggtgaagaatattttgctcaacagttaattgattatgat
cctattataaatcaatgttcatgacaatgagtagcagggacggggtttgatgcccaacca
ttttttcgaatttttaatcctgagttacaacaaaaaaaatatgatccaacatcaagttat
tgtaataaatttttaaaaaaccgcctcacaattaataaaattgttgattataaaatatca
gttaaaaaagcgttagagatttataaagactgtacaataaagactgtataa
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