Sorangium cellulosum So ce56: sce0078
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Entry
sce0078 CDS
T00634
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
Organism
scl
Sorangium cellulosum So ce56
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAN90234
UniProt:
A9GL76
LinkDB
All DBs
Position
complement(108007..111771)
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AA seq
1254 aa
AA seq
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MTADATRPRGARELADEPARRRIRDDLRTTLVVEAAAGTGKTTALVSRIVAVLRRAPEEG
GGTLDRIVAVTFTEKAAGEMKLRLRAEIERARSDPGAGPAERARLDEALAHLEAARIGTI
HSFCADLLREWPVEARVDPLFQVAAADQAEALFDQAFDAWFQRTLNDPPEGVRRILRRRP
RDGAQGPRDLLRSAAWRLAEHRDFTRPWRRDPFDRERAIDEILDRLAALADLGAEADREG
DYLAQSLRNLDRYLAELRRREEVTGGRDHDGLEAELGDVARWKEWRWKGSGKAFGGDLTR
AEVLAQRDRVKVELDAVLTAASADLAACLSRELRPPIEAYDALKARAGKLDFLDLLLCAR
DLLRSSRGVREELNLRFSHLFVDEFQDTDPLQAEILLLLAADDLSEADWTRARPVPGKLF
VVGDPKQSIYRFRRAEVALYEATKARLVACGASVLYLSTSFRSAPSIQEAVNAAFAPLMQ
GGTAEGERAATQARYVALERFRDDPPEQPTVIALPVPRPYGDFGKISDFRVRQSIPDAVG
AFVHHLIHGGAGAGAALDGDGARRWTVTERERPGQRVPLEARHICLLFKRFQTFGEDATR
AYVRALEARRIPHVLVGGRSFHDREEVMAVRSALLAIEWPDDELSVYATLRGPLFALTDD
VLLLYRDRFRRLHPLFQPPDDGSLDLAVEGGARPLREVAEALAVLGRLHRERNRRPIADT
LGGLLDETRAHAGIAIWPTGEQALANVLRVMDLGRRFEAAGATSFRAFVERLELDAERGE
VAEAPVVEEGTEGVRIMTVHRAKGLEFPVVILADPASPAVHQLPSRHVDPELGLWAEPIA
GCVPAELVERRDEVLRRDREEAVRLAYVAATRARELLVVPAVGDARPGDGTSDGWLDVLH
PVLYPAPRERRSPRRCEDLGCPPFGTDTVLERPARCEADERDAVAPGEHAPMAGSHRVVW
WDPGALDLDREPEAGLRQQRILQADASGAGAGGAAVSAGPASGAGVLGSSGATASAVLAA
ELGQRGHEAWQEARQRAIVDGATAAVRVKTATEISHEAAEAAAAAAGAGAAAARRSGGGA
ARGERADALPVISFEQTEIAREGRPYGKRFGTLVHAVLAEVDLRAGEDEVRTVAAAQARL
LGAPAEELDAAVAAAVAALDHPLLRRAAESAARGACERETPLLLRLEDGTIAEGIVDLSF
RESVGDVGVWTVVDFKTGSDAGTAHAAQEAQVRLYVQAIAEATGERARGVVLRV
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgacgcgacccggccgcgcggcgcgcgggagctcgcggatgagcccgcccgc
cgccgcatccgcgacgatctgcggacgacgctcgtcgtcgaggccgccgcgggcaccggc
aagaccaccgcgctcgtgtcgcggatcgtcgccgtgctgcggagggcgcccgaggagggc
ggcgggacgctcgatcgcatcgtcgcggtgaccttcacggagaaggcggccggcgagatg
aagctgcgcctccgggccgagatcgagcgggcgcgcagcgacccgggcgcaggcccggcg
gagcgcgcgcggctcgacgaggcgctcgcgcacctggaggcggcccgcatcgggaccatc
cactccttctgcgccgacctcctgcgcgagtggccggtcgaggcgcgcgtcgacccgctg
ttccaggtggcggccgcggatcaggccgaggcgctcttcgaccaggccttcgacgcctgg
ttccagcgcaccctgaacgacccgcccgagggcgtgcgccggatcctgcgacggcgcccg
cgcgacggcgcgcagggcccgcgcgacctgctccggagcgcggcgtggaggctcgccgag
caccgcgacttcacgcgcccctggcggcgcgatccgttcgaccgcgagcgcgcgatcgac
gagatcctggaccgcctcgcggcgctcgcggacctgggcgccgaggccgaccgggagggc
gactacctcgcgcagagcctccggaacctcgaccgctacctcgcggagctccgccgccgc
gaggaggtcacgggcgggcgcgaccacgacggcctggaggccgagctcggcgacgtcgcg
cgctggaaggaatggcgctggaagggctcaggcaaggcgttcggcggggatctcacgcgc
gccgaggtgctcgcgcagcgcgatcgcgtgaaggtcgagctcgacgccgtgctcacggcc
gcgagcgccgatctcgccgcctgcctctcgcgcgagctccggccgccgatcgaggcgtac
gacgcgctcaaggcccgcgccggcaagctcgacttcctcgacctgctcctctgcgcccgg
gacctcctccgatcgagccgcggcgtgcgcgaggagctcaacctccgcttctcgcacctc
ttcgtcgacgagttccaggacaccgacccgctccaggcggagatcctgctcctgctcgcg
gccgacgacctctccgaggccgactggacgcgggcgcgcccggtgcccggcaagctcttc
gtggtcggcgatccgaagcagtccatctaccgcttccgccgcgccgaggtcgcgctctac
gaggcgaccaaggcccggctcgtcgcgtgcggcgcgagcgtcctgtacctgtcgacgagc
ttccgcagcgccccgtcgatccaggaggccgtcaacgcggcgttcgcgccgctgatgcag
ggaggcaccgcggagggcgagcgcgccgcgacccaggcgcggtacgtcgcgctcgagcgg
ttccgggacgatccgccggagcagccgacggtcatcgcgctcccggtgccgcgaccttac
ggcgacttcggcaagatctccgatttccgtgtgcggcagtcgatcccggacgcggtcggc
gccttcgtccaccacctcatccacggcggcgcgggcgccggcgcggcgctggacggtgac
ggcgcgcggcgctggacggtcacggagcgcgagcgcccgggccagcgggtgccgctcgag
gcgcggcacatctgtcttttgttcaagcgtttccagaccttcggggaggacgcgacccgc
gcctacgtgcgggcgctcgaggcgcggcggatcccgcacgtgctcgtgggcgggcggtcg
ttccacgatcgcgaggaggtgatggcggtgcggagcgcgctgctcgcgatcgagtggccg
gacgacgagctcagcgtctacgcgacgctgcgcgggcccctcttcgcgctgacggacgac
gtgctcctgctctaccgcgaccgcttccggcgcttgcacccgctgtttcaaccgccggac
gacggatcgctcgatctcgcggtggagggcggcgcgcggccgctccgggaggtcgcggag
gcgctcgcggtgctcggcaggctgcaccgcgagcgcaaccggcggccgatcgcggacacc
ctcggcgggctcctcgacgagacgcgcgcgcacgcgggcatcgcgatctggccgacgggg
gagcaagcgctcgcgaacgtgctgcgggtgatggatctcgggcggcgcttcgaggcggcc
ggcgcgacgtcgttccgcgcgttcgtggagcggctcgagctcgacgccgagcggggcgag
gtcgcggaggcgccggtcgtcgaggaggggacggagggggtgcggatcatgacggtgcac
cgggccaaggggctcgagttcccggtggtgatcctggcggatccggcgtcgccggcggtg
caccagctcccgtcgcggcacgtggatccggagctcggcctgtgggcggagcccatcgcc
ggctgcgtgcccgcggagctcgtcgagcgccgcgacgaggtgctgcgccgcgatcgcgag
gaggcggtgcggctcgcgtacgtggcggcgacgcgcgcgcgcgagctcctggtcgtgccc
gcggtgggcgacgcgcgcccgggcgacggcacgagcgacggctggctcgacgtgctgcac
ccggtgctctacccggcgccgcgcgagcgacggagccctcggcgctgcgaggatctcggt
tgcccgccgttcgggaccgacacggtgctggagcgtccggcgcggtgcgaggccgacgag
cgggacgcggtcgcgcccggggagcacgcgccgatggcgggctcgcaccgcgttgtgtgg
tgggatcctggcgcgctggatctggatcgcgagccggaggcggggctgcgccagcagcgg
atcctgcaggcggacgcgagcggcgccggtgcgggcggggcggcggtgagcgccgggcca
gcgagcggcgccggggtcctcgggagcagcggggcgacggcgagcgccgtgctggcagcg
gagctcgggcagcgcgggcatgaggcctggcaggaggcgcggcagcgggcgatcgtggac
ggcgcgacggcggcggtccgcgtgaagacggcgacggagatcagccacgaggcggcggaa
gcggcagcggcggcggccggagcgggggcggcggccgcgcggcggagcggcggcggcgcg
gcgcgcggggagagggcggacgcgctgccggtgatctcgttcgagcagacggagatcgcg
cgcgagggccggccctacggcaagcggttcgggacgctcgtgcatgcggtgctcgccgag
gtggatctccgggcgggcgaggacgaggtgaggacggtggctgcggcgcaggcgaggctg
ctcggggcgccggccgaggagctcgacgcggcggtcgcggcggcggtcgcggcgctcgat
cacccgctgctccggcgcgcagcggagagcgccgcgcgcggggcgtgcgagcgggagacg
ccgctcctcctgcggctcgaggacgggacgatcgccgagggcatcgtcgacctctcgttc
cgggagagcgtgggcgacgtgggcgtctggaccgtggtcgatttcaagaccggctccgac
gcgggcacggcgcacgcggcgcaggaggcgcaggtgcggctttacgtgcaggcgatcgcg
gaggcgacgggtgagagggcgagaggggtggtgctcagggtgtga
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