Sorangium cellulosum So ce56: sce1161
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Entry
sce1161 CDS
T00634
Symbol
topI
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scl03032
]
sce1161 (topI)
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce1161 (topI)
Enzymes [BR:
scl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
sce1161 (topI)
DNA replication proteins [BR:
scl03032
]
Prokaryotic type
DNA Topoisomerases
sce1161 (topI)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
sce1161 (topI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAN91318
UniProt:
A9F100
LinkDB
All DBs
Position
1614968..1616314
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AA seq
448 aa
AA seq
DB search
MKSGSATTTHEKRRPRSAPRRERRGAATGVVLRRRRVSVSVESVETVELARADGELAGTG
QLTPSPVESAESAGLRYVNDGEPGISRRGAGKGFRYIDVDGRPVKDEATLARIRRLAIPP
AWTEVWICRSERGHIQATGRDARGRKQYRYHPRWREVRDETKYDRMLAFGAALPAIRAAS
ERDLALPGLPREKVLAAVVRLLDETSIRIGNDEYARDNDSYGLTTLHDEHVEIEGSLIRF
QFRGKGGKEHAMTVRDRRLARIVKRCQDVPGHELFQYIDGEGRRQRIHSDDVNEYLRSVA
GHDFTAKDFRTWTGTVLCASFFCEMEIASSVRQVKKRVAQVIDRVSARLGNTRAVCQRCY
VHPAVIRAYTEGALQSLIDAEEAVADGALAALRPEEAKMLRIVRGFGEREAVPLVTRLRE
SVRSARAVNARRAGKSAKRAPGERRAAA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcggaagcgccacgaccacccatgaaaagcgccgccctcggagcgctccgcgc
cgcgagaggcgcggagcggcgaccggcgtcgtgctccgccggcgccgcgtcagcgtgtcg
gtcgagtccgtcgagacggtcgagctcgcccgcgcggacggcgagctcgcggggacaggg
cagctcaccccgtcaccggtcgagtccgccgagtcggccgggctccggtacgtgaacgac
ggcgagccggggatctccaggcgaggggcgggcaagggcttccgttacatcgacgtcgac
ggtcgccccgtcaaggacgaggcgacgctcgcgcgcatccgccgcctcgcgatcccgccc
gcgtggaccgaggtgtggatctgccggagcgagcgcgggcacatccaggcgacagggcgg
gacgcgcgcggccggaagcagtaccggtatcacccgcgctggcgcgaggtccgcgacgag
acgaagtacgaccgcatgctcgcgttcggcgcggcgctcccggcgatccgcgcggcgagc
gagcgggatctcgcgctgcctggcctgccgcgcgagaaggtgctggcggccgtggtgcgc
ctgctcgacgagacgtcgatccgcatagggaacgacgagtacgcgcgcgacaatgactcg
tatgggctcaccacgctccacgacgagcacgtcgagatagaggggagtctcatcaggttc
caattcaggggcaagggcggcaaggagcacgcgatgacggtgcgggatcggcggctcgcc
cgcatcgtgaagcgctgtcaggacgtgcccggccacgagctgttccagtacatcgacggc
gagggccggcggcaaaggatccattcggacgacgtgaacgagtacctgcgctcggtcgcg
ggccacgacttcacggcgaaggacttccgcacctggaccggcaccgtgctgtgcgcgtcg
ttcttctgcgagatggagatcgcgagctcggtccgccaggtgaagaagcgcgtggcgcag
gtgatcgacagggtgtccgcacgcctgggcaacacacgcgcggtctgtcagcgttgttat
gtccaccccgccgtgatccgcgcctacacggagggcgccctgcagtccctgatcgacgcc
gaggaggccgtcgcggacggggcgctcgcggcgctccggccggaagaggcgaagatgctc
cggatcgtccgcggcttcggcgagcgagaggccgtgccgctcgtgacccgcctccgcgag
agcgtgcgctcggcgcgcgcggtgaacgcgcggcgagccggcaagagcgcgaagcgtgcc
cccggggaacgacgcgccgcggcctga
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