Sorangium cellulosum So ce56: sce1712
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Entry
sce1712 CDS
T00634
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03030
DNA replication
scl03430
Mismatch repair
scl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sce1712
03430 Mismatch repair
sce1712
03440 Homologous recombination
sce1712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scl03032
]
sce1712
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce1712
Enzymes [BR:
scl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sce1712
DNA replication proteins [BR:
scl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
sce1712
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
sce1712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CAN91870
UniProt:
A9FIM8
LinkDB
All DBs
Position
2331197..2332093
Genome browser
AA seq
298 aa
AA seq
DB search
MTEQREGVGPERATGAEPPAGSPWDDPIESAPLVFLDLEMTGLRPESDRVIEVCAERTRG
DACEDAITSLVRPEPGVFGNAHVHGIDPRELAGAPTFAELCDRIDQVTEGAVLVAHAAAW
DVAFLEAELARAGRARRLPHYLDTLVLSRRAFALPSHSLASLCRELGVHRERAHRAEDDV
HALRAVFRKIVEVLAPRTPRDLWHVRIGERHARPALVAAAVRAAEHAATVRVRYRPARRG
PEELVVCVTGVRTDLDPPRVLGYLLPSRSRRELRADRILAIEPISPGELGPDGVPQRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcagcgcgaaggggtggggcccgagcgggcgaccggcgcggagccccctgcc
ggctcgccatgggatgatccgatcgagagcgcgccgctcgtgttcctcgatctcgagatg
acgggcctccgccccgagagcgatcgcgtgatcgaggtctgcgccgagcggacgcggggg
gatgcgtgcgaggacgcgatcacgtcgctcgtgcggcccgagccgggcgtgttcggcaac
gcgcacgtgcacggcatcgatccgcgggagctcgcgggcgcgcccacgttcgccgagctc
tgcgatcgcatcgaccaggtcacggagggcgcggtgctcgtcgcgcacgcggccgcgtgg
gacgtggcgttcctcgaggccgagcttgcgcgggcgggcagggcgaggcgcctcccgcac
tacctcgacacgctcgtcctctcccgccgggccttcgccctgccgagccacagcctcgcc
tccctctgcagggagctcggcgtgcaccgcgagcgcgctcaccgcgccgaagacgacgtc
cacgccctgcgcgccgtgttccgcaagatcgtggaggtcctcgcgccgcggacgccgcgc
gacctgtggcacgtccggatcggcgagcgccacgcccgcccggcgctggtggcagcggcg
gtgcgcgcggccgagcatgccgccaccgtgcgcgtgaggtaccgtccggcgcgccggggg
ccggaggagctcgtcgtgtgcgtaacgggggtgcgaacggacctcgacccaccccgggtt
ctcggctatctgctcccgtcgcgcagccgtcgcgagctacgggccgatcgcatcctggcg
atcgagccgatttcgccgggagagctcgggccggacggcgtgccgcaaagggcctga
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