Sorangium cellulosum So ce56: sce2016
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Entry
sce2016 CDS
T00634
Name
(GenBank) putative pilin biogenesis protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scl02044
]
sce2016
02035 Bacterial motility proteins [BR:
scl02035
]
sce2016
Secretion system [BR:
scl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
sce2016
Bacterial motility proteins [BR:
scl02035
]
Pilus system
Pilus assembly proteins
sce2016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
CAN92175
UniProt:
A9FQN8
LinkDB
All DBs
Position
complement(2735800..2737899)
Genome browser
AA seq
699 aa
AA seq
DB search
MTTQLKDIDPGKGDDFAANVSSNTGQPRRFFTVIGDLDTTTQRIWSSRSIRPADVATDGL
GSYTGTMTGSGAPAQATAFATALSSASRALDLDPSAPVPPQCSGGLQATNAADCARRLIE
WEVGAPMPSGVASREGNVLGSIYHSTPVVVGPPNDYIPDESYRAFAESPAQKTRPLVLYT
ATTDGQLHAFQVTAADADDALKVDKVENNELWSFLPPHVLPRLLATFNQQSLLLDGAPVV
KNVVFERTSAQVSSANATWNTVLVASGGAGGSFYYALDVTNPKAPQFLWQLSTDDSGTPL
FGDATPTPAIGMVEMQDGAQIKEIAVAILPGGSAPLDTSQPACNRQNATPPLFHPTGTLA
VRDSVRCWGSAGTGGPVGPARSLTIVRLDTGEIIRTFRGRVDEAPGGIASRTTRVDFDSP
ITGVPVPFPAGVGEVAERIYVGDADGTLWRVSLTSTNPDDWTVDLAWDAYSFPTDSAARS
QPIQTTPIVSTDPLGNKVILFSTGDQEAFTASGAIETRVWSITEKPHDTSLRFSENWVVP
FTGGERVTGPISLFNGCAYFATFRPVAPGTYACADGRGAIWGVDYLLGNTDSPAYPNGCL
VVDPAAPPERFELQSPGTIVFGVAVTQKPTCVETAEYTDDYFGPQTIVRHSTPPEYQLVF
HTGAAGDADAQGGATRTSTRTLQRPRKVVKIDSWATLIE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcagctgaaggacatcgaccccggcaagggcgatgacttcgcggccaacgtc
agctcgaacaccgggcagccgcggcggttcttcaccgtgatcggcgacctcgacaccacc
acgcagcgcatctggtcgagccggagcatccgccccgccgacgtcgccacggacgggctg
ggcagctacacgggcacgatgaccggcagcggcgcgcccgcgcaggcgacggcgttcgcg
accgctctctccagcgcgtcccgcgcgctcgatctcgatcccagcgcgcccgtcccgccg
cagtgctcgggcgggctgcaggcgaccaacgccgcggactgcgcccggcgcctcatcgag
tgggaggtcggcgcgccgatgccctcgggcgtcgcctcccgcgagggcaacgtgctcggc
agcatctatcactccacgccggtcgtcgtggggccgccgaacgactacatccccgacgag
tcctaccgggccttcgcggagagccccgctcagaagacccggccgctcgtgctctacacg
gcgacgaccgacgggcagctgcacgccttccaggtgaccgcggcagacgcggacgacgcg
ctcaaggtggacaaggtcgagaacaacgagctctggtcgttcctgccgccccacgtgctc
ccccggctgctcgcgacgttcaaccagcaatcgctgctgctcgacggcgcgcccgtcgtg
aagaacgtcgtcttcgagcgcacgtcggcgcaggtgagcagcgccaacgcgacctggaac
accgtgctcgtcgccagcggcggcgcgggcggcagcttctactacgcgctcgacgtgacg
aacccgaaggcgccgcagttcctctggcagctctccacggacgatagcggcaccccgctg
ttcggcgacgcgacgccgacgccggcgatcggcatggtggagatgcaggacggcgctcag
atcaaggagatcgcggtcgccatcctgcccggcggctccgccccgctcgacacgagccag
cccgcgtgcaaccggcagaacgcgacgcccccgctcttccatccgacgggcaccctggcg
gtccgcgactcggtccggtgctggggcagcgcgggcaccggcggccccgtcggcccggcg
cgctcgctcacgatcgtccggctcgacacgggcgagatcatccgcacgttccggggccgc
gtcgacgaggccccgggcgggatcgcctcgcggaccacgcgggtcgacttcgactctccg
atcaccggcgtccccgtgccgttcccggcgggcgtcggcgaggtcgccgagcgcatctac
gtcggcgatgccgacgggacgctctggcgcgtcagcctgacgagcaccaacccggacgac
tggaccgtggacctcgcctgggacgcgtactcgttcccgaccgacagcgcggcgcgcagc
cagccgatccagacgacgccgatcgtgagcaccgatccgctcggtaacaaggtcatcctg
ttctccacgggcgatcaggaggcgttcacggcgagcggcgccatcgagacgcgggtctgg
tcgatcaccgagaaaccgcacgacacaagcctccgcttcagcgagaactgggtcgtcccc
ttcacgggcggcgagcgcgtgaccgggcccatctccctcttcaacggctgcgcgtacttc
gcgacgttcaggcccgtcgcgcccgggacctacgcgtgcgcggacgggcgcggcgcgatc
tggggcgtcgactacctgctcggcaacacggactcgccggcgtatccgaacggctgcctc
gtcgtcgatccggccgctcctccggagcgcttcgagctgcagtcgccgggcacgatcgtc
ttcggcgtggccgtgacccagaagccgacctgcgtggagacggcggagtacaccgatgac
tacttcggcccgcagacgatcgtccggcactccaccccgcccgagtaccagctcgtgttc
cacaccggcgccgccggcgacgcggacgcccaggggggcgcgacgcgaacgagcacgagg
acgctgcagcggccgcgcaaggtcgttaagatcgactcgtgggccaccctcatcgaatga
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