Sorangium cellulosum So ce56: sce2612
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Entry
sce2612 CDS
T00634
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sce2612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scl03019
]
sce2612
Messenger RNA biogenesis [BR:
scl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
sce2612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CAN92771
UniProt:
A9G732
LinkDB
All DBs
Position
complement(3529460..3531058)
Genome browser
AA seq
532 aa
AA seq
DB search
MNAMLIEEEGRRVLVDCGVMFPNDQVLGVEVAIPDLSYVREAGGVDAVLLTHGHEDHIGG
LPSLLREFPVPVFGTRFTLRLVRERLAEHGIDVPLREVEPQQHFAAGPFRAEPLRVTHSI
PDAVGYAIETGEGILIHTGDYKIDLTPVAGERLDLGRFAEYGRAGVAALLSDSTNSERDG
WSVSETAVAEGFTRRFREAKGRILVALFASNVHRVQSVLDLAAQLGRKVVLAGRSLATNT
RIAEEIGILRVPPGVLVDDATAASLPPERLVVLASGAQGEPNSALARMAMGDHHRLRVDP
GDTVIFSSRAIPGNEIAVSQLANRLAKRGAVVLDRGLDPIHASGHAQAEEQKVLLDAVRP
EHFVPIHGEYRMLLAHARTALRMGVPASGVFVVEDGDSLILEDGRMRLGETVKSGRVWLD
ARGGLDVSELVLREREQISDQGLVMVLVVADRKTGEILRGPDLLGRGVAHFEEGGPLYAA
ALDSARDALAALSPAARTLAPALEDALSRGVRRVFRREASRRPAVLPLAVLL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatgctgatcgaggaggaaggccgccgcgtgctcgtcgactgcggcgtcatg
ttccccaacgaccaggtgctgggcgtcgaggtcgcgatccccgacctcagctacgtccgc
gaggcgggcggggtcgacgcggtgctgctcacgcacggccacgaggatcacatcggcggg
ctgccgtcgctgctgcgcgagttccccgtccccgtgttcgggacgcgcttcacgctccgg
ctggtgcgcgagcgcctcgccgagcacggcatcgacgtgccgctccgcgaggtcgagccg
caacagcacttcgcggccggaccgttccgcgccgagcccctccgcgtgacccactccatc
cccgacgcggtcggttacgccatcgagacgggcgaggggatcctcatccacacgggcgac
tacaagatcgatctcacccccgtggccggcgagcggctcgatctcggccgcttcgccgag
tacggccgggccggcgtggcggcgctcctctcggactcgaccaactcggagcgcgacggc
tggtcggtcagcgagaccgcggtggccgaaggcttcacccggcggtttcgcgaggcgaag
gggcgcatcctcgtcgcgctgttcgcctccaacgtccaccgggtccagagcgtcctcgac
ctcgccgcccagctcggccgcaaggtggtgctcgccgggcgcagcctcgcgaccaacacg
cggatcgccgaggagatcggcatcctgcgcgtcccgcccggcgtgctcgtcgacgacgcc
acggcggcctcgctcccgcccgagcgcctcgtcgtgctcgcttcgggcgcgcagggcgag
ccgaacagcgccctcgcgcgcatggccatgggcgaccaccaccggctgcgggtcgatccg
ggggacacggtgatcttctcgtcccgcgcgatccccggcaacgagatcgccgtcagccag
ctcgccaaccgcctggcgaagcgcggcgccgtggtgctcgatcgcggcctcgatcccatc
cacgcgagcggccacgcgcaggccgaggagcagaaggtcctcctcgacgccgtccggccg
gagcacttcgtccccatccacggcgagtaccggatgctgctcgcccacgcgcgcacggcg
ctccggatgggcgtgccggcgtcgggggtcttcgtcgtcgaggacggcgactcgctgatc
ctcgaggacggccggatgcgcctcggcgagacggtgaagagcgggcgggtgtggctcgac
gcgcgcggcgggctcgacgtctccgagctggtgctccgcgagcgcgagcagatctcggat
caggggctcgtgatggtcctggtggtggccgaccgcaagacgggcgagatcttgcgcggc
cccgatctcctcgggcgcggcgtggcgcacttcgaggagggcggcccgctgtacgccgcc
gcgctcgacagcgcgcgcgacgcgctcgctgcgctgtcccccgcggcgcgcacgctggcg
ccggcgctggaggacgcgctcagccgcggcgtgcggcgggtgttccggcgcgaggcctcg
cggcgccccgccgtgctcccgctggccgtgttgctgtga
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