KEGG   Sorangium cellulosum So ce56: sce2802
Entry
sce2802           CDS       T00634                                 
Symbol
lhr1
Name
(GenBank) putative ATP-dependent helicase, N-terminal fragment
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
scl  Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:scl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scl03400]
    sce2802 (lhr1)
Enzymes [BR:scl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     sce2802 (lhr1)
    5.6.2.6  RNA 3'-5' helicase
     sce2802 (lhr1)
DNA repair and recombination proteins [BR:scl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    sce2802 (lhr1)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH ResIII DprA_WH
Other DBs
NCBI-ProteinID: CAN92961
UniProt: A9GB61
LinkDB
Position
3822283..3826776
AA seq 1497 aa
MFHPVVDRWFRDRFGAPAPAQERAWPVIAAGRDALISAPTGAGKTLAAFLFCLDRLVRDA
ARGALEDRTDVLYISPLKALSHDVHRNLEQPIAEISAAMEAAGLPAPGIRALVRTGDSPA
QERRAMAARPPHVLVTTPESAFILLTSASGRRALSGVRTVILDEVHAIAGDKRGAHLALS
LERLEDLVISQGGARPQRVGLSATVRPIEIAARLVAGARELPQIVDVGQRRDLDLAIEVP
RDELGAVCTHEQWTEIYDRIAALAEGARSTLVFVNTRRLVERVAHALGARLGEDVVAAHH
GSLSRARRLSAERRLKAGELRVVVATASLELGIDVGAVDLACLVGSPRSINVALQRIGRS
GHALAATPRGRLFPLTRDQLVECAAIVRAARRGELDRMTSREGPLDVLAQQIIAACACEE
RDQEGLYALVRRAAPYEGLSRRDFDAVVAMVSGGAAAADDGASAARGARQRAGSLVYRDA
IGGRLRGRRGARLAALTSGGAIPDIAAVDVVLQPDGTKVGTLDEDFAIESSGGDVFLLGN
TSWRVLRLEGGQMWVEDAHGAAPTVPFWLGEAPARTPELSAEVAALRAEVAARLDEERAD
GARPAAERGQGGEEARAARSRAARWLMEACALDARGALLVRDYIEAGRAALGAVPDGATV
VVERFFDEAGGQQIVVHTPLGGRVNRALGLALRKRFCRSFDFELQAAATDDGVLLSLSAE
HGIPIDEVLDLVRPEGLEEVLVQAALQGPMFRTRFRWAASRALALLRFRGGRRVPPALQR
MRADDLLLSIFPEQQGCQDNHGLFAHVEPPDHPLVREALRDCLTELMDVEGLRALLVGLR
SGAIRVVALDTPEPSVFSHEILNANPYAFLDDAPLEERRARAVRVRRGLPAEVAERLGGL
DPQVVAEVVAEARPDVRDADELHELLLDRVALPAEEGIRSGLARHFEALCAAGRAAEVGA
APGAGVPRAPRWVATERRPLVEVIWPEAVFAPDVAVPPAVRGDAGAVDRGAAITALVRGF
LSAAGPISTEDLASRLDVPAYEAQSALARIELAGGALRGRFLPSAPPRPSQAAAGGGDLS
QAAAGGGDLSQAAAGGGDLSIEWCDRHLLARIHRRTVTGLRKAIEPATAAELLRFLLAWQ
GVRPGTQARGPGGLGRVIEQLQGFELAAGAWEQAVLPARVAGYDEGLLDALCLSGEVAWG
RVVPRDAAAPTRAAPITLALRRDLPWLLAPREAEGAPPPASLSEAAQGVLSFLTRAGASF
FDDLAVGVGGVGGAGRSRDEVEEALWELVAAGLVTGDGFAALRSLLGGGAAVALGAGRLR
GGARRGGPVASGRWSLLRSRPDAFAPAAGEDAEGPDVVEALAHQYLRRYGVVCRELLARE
PRPPAWRDLLRVYRRLEMAGQLRGGHLVAGFVGEHFALPEALDALRAVRREPLSGEIVQL
SACDPLNLVGIVTPGPRVPAALGNVVIYRDGVPLLPVTAAAPGGTGQAMSAAAGAAM
NT seq 4494 nt   +upstreamnt  +downstreamnt
atgtttcaccccgtcgtcgaccggtggttccgcgaccgcttcggcgcccccgcccccgcc
caggagcgcgcctggccggtcatcgcggccggccgcgacgcgctgatcagcgcgccgacc
ggcgccggcaagacgctcgctgccttcctcttctgcctcgaccggctcgtccgcgacgcg
gcgcggggcgcgctcgaggaccgcacggacgtcctttacatctcgccgctgaaggcgctc
tcccacgacgtccaccgcaacctcgagcagccgatcgccgagatctcggcggccatggag
gcggcaggcctgcccgcgccgggcatccgggccctcgtgcggaccggcgacagccccgcg
caggagcggcgcgccatggcggcccggccgccgcacgtgctcgtcacgacgccggagtcc
gcgttcatcctgctgaccagcgcgtcggggcggcgcgcgctctccggggtgcgcaccgtg
atcctcgacgaggtccacgcgatcgccggcgacaaacgcggcgcccacctcgcgctctcg
ctcgagcggctcgaggacctcgtaatcagccagggcggcgcccggccgcagcgcgtgggg
ctcagcgccacggtccgccccatcgagatcgccgcccggctcgtcgccggcgcgcgcgag
ctgccccagatcgtcgacgtcgggcagcggcgggacctcgatctcgccatcgaggtgccc
cgcgacgagctcggcgcggtctgtacgcacgagcagtggaccgagatctacgaccgcatc
gcggcgctcgccgagggagcgcggtcgaccctggtgttcgtcaacacgcgccgcctcgtc
gagcgggtcgcgcacgcgctcggcgcgcggctcggcgaggacgtcgtggcggcccaccac
ggcagcctctcgcgggcccggcgcctctcggcggagcggcgcctcaaggccggggagctc
cgggtcgtcgtcgcgaccgcgtcgctcgagctcggcatcgacgtcggcgcggtcgacctc
gcctgcctcgtcggctcgccgcggtcgatcaacgtcgccctccagcgcatcggccgctcg
ggccacgccctcgccgcgacgccgcgcgggcggctcttcccgctgacgcgcgaccagctc
gtcgagtgcgcggcgatcgtgcgcgcggcgcgccgcggcgagctcgatcggatgacgtcg
cgcgaggggccgctcgacgtgctcgcgcagcagatcatcgccgcgtgcgcgtgcgaggaa
cgggaccaagaggggctctacgcgctcgtccgaagggccgcgccttacgaaggcctctcg
cgccgcgacttcgacgcggtggtggccatggtctcgggcggcgccgccgcggcggacgac
ggcgcgtccgcggcccgtggcgcgcggcagcgggccgggtcgctcgtctaccgcgacgcg
atcggcggccggctgcgcgggcggcgcggcgcgcggctcgcggcgctcacctcgggcggg
gcgatccccgacatcgcggcggtcgacgtggtgctccagcccgacggcaccaaggtcggc
acgctcgacgaggatttcgcgatcgagtcgtccgggggcgacgtcttcctgctgggcaac
acctcctggcgggtgctccggctggagggcggccagatgtgggtcgaggacgcccacggc
gccgcgccgacggtgccgttctggctcggagaggcgccggcgcgcacgccggagctctcg
gccgaggtcgccgcgctccgcgccgaggtcgccgcgcgcctcgacgaggagcgggccgat
ggagcgcggccggcggccgagcggggccagggcggcgaggaggcgcgggcggcgcggtcc
cgggcggcgcgctggctcatggaggcgtgcgcgctcgacgcgcgcggggcgctgctcgtg
cgcgactacatcgaggcggggcgcgcggcgctcggcgcggtcccggacggcgcgaccgtc
gtggtcgagcgcttcttcgacgaggccggggggcagcagatcgtcgtccacacgccgctc
ggcggccgcgtgaaccgcgcgctcgggctcgcgctgcgcaagcgcttctgccggtcgttc
gacttcgagctccaggcggcggcgaccgacgacggcgtgctgctctcgctgtcggcggag
cacgggatcccgatcgacgaggtgctcgatctggttcgccccgagggcctcgaggaggtg
ctcgtccaggcagctctccagggcccgatgttccgcacgcgcttccgctgggccgcgtcc
cgcgcgctcgcgctgctccggttccgcgggggccggcgggtgccgccggcgctccagcgc
atgcgcgccgacgacctcctgctctcgatcttccccgagcagcagggctgccaggacaac
cacgggctcttcgcgcacgtcgagccgccggatcacccgctcgtccgcgaggcgctgcgc
gactgcctgaccgagctgatggatgtcgaggggctgcgcgcgctgctcgtcggcctgcgc
agcggggcgatccgcgtcgtcgcgctcgacacgccggagccgagcgtcttctcgcacgag
atcctgaacgcgaacccctacgcgttcctcgacgacgccccgctggaggagcgccgcgcg
agggcggtccgggtgcggcgcgggctcccggcggaggtcgccgagcggctgggcgggctc
gatccgcaggtcgtcgccgaggtggtcgccgaggcgcggccggacgtgcgcgacgcggac
gagctgcacgagctcctgctcgaccgggtcgcgctccccgcggaggaggggatccggagc
ggcctcgcgaggcacttcgaggcgctctgcgccgcggggcgcgcggccgaggtgggcgcc
gccccgggcgcgggcgtgccgcgcgcgccgcgctgggtggcgaccgagcggcggccgctc
gtcgaggtgatctggccggaggcggtgttcgcgcccgacgtcgcggtgccgcccgccgtg
cgcggggacgccggggcggtcgatcgcggcgccgcgatcacggcgctcgtccgcggcttc
ctgagcgccgcggggccgatctcgaccgaggatctcgcgtcgcggctcgacgtccccgcg
tacgaggcgcagtccgcgctcgcgcggatcgagctcgccggcggcgcgctgcgcgggcgc
ttcctgccgagcgcgccgccgcggccgtcgcaggccgccgcgggcggcggcgatctgtcg
caggccgccgcgggcggcggtgacctgtcgcaggccgccgcgggcggcggcgatctgtcg
atcgagtggtgcgaccgccatctcctcgcccgcatccaccgccgcaccgtcaccggcctg
cgcaaggcgatcgagcccgcgaccgcggcggagctcctccggttcctccttgcgtggcag
ggcgtgcggccaggcacgcaggcgcgcgggccggggggcctcgggcgggtgatcgagcag
ctgcagggcttcgagctcgccgccggcgcgtgggagcaggcggtgctgcccgcccgcgtg
gccggctacgacgaggggctgctcgacgcgctctgcctgtccggcgaggtggcgtggggc
cgcgtggtcccgcgcgacgccgcggcgcccacgcgcgctgcgccgatcacgctggcgctg
cgccgcgatctcccgtggctcctcgcgccgcgggaggccgagggcgcgccgccgccggcg
tcgctctccgaggcggcgcagggcgtgctgtcgttcctgacgcgcgccggcgcgtcgttc
ttcgacgacctcgccgtcggcgtgggcggcgtgggcggcgcgggtcgctcccgggacgag
gtcgaggaggcgctctgggagctcgtcgccgcggggctcgtgaccggcgacggcttcgcg
gcgctgcgctcgctgctcggcggcggcgcggccgtcgcgctgggcgcgggccgcctgcgc
ggcggggcgcggcggggcggccccgtcgcgtcgggcaggtggtcgctcctgcgatcgcgc
ccggacgcgttcgcgcccgctgccggcgaggacgccgagggcccggacgtcgtcgaggcg
ctcgcgcaccagtacctccgccgctacggcgtggtctgtcgcgagctgctcgcgcgcgag
ccgcggccgcccgcgtggcgcgacctcctccgggtctaccggcggctcgagatggcgggt
cagctccggggagggcacctcgtcgccggcttcgtgggcgagcatttcgcgctacccgag
gcgctcgacgcgctccgcgccgtccgccgagagcccctgtccggcgagatcgtgcagctc
tcggcgtgcgacccgctgaacctggtcggcatcgtcacgccggggccgagagtgccggcc
gcgctcgggaacgtggtcatctaccgcgacggcgtgccgctcctgcccgtgaccgcggcc
gcgcctggcgggacgggacaggcgatgtccgctgccgcgggagcagcgatgtga

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