Sorangium cellulosum So ce56: sce2839
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Entry
sce2839 CDS
T00634
Name
(GenBank) Exodeoxyribonuclease V beta chain
Organism
scl
Sorangium cellulosum So ce56
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CAN92998
UniProt:
A9GBF4
LinkDB
All DBs
Position
complement(3873990..3878033)
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AA seq
1347 aa
AA seq
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MSAAPRGAELAEGDALIYAFRRNVVVAASAGTGKTHRLTALYVLLTLGLTSLGLPDAASA
APPVPPDRIVATTFSRAAAREIAHRVERSLREIARWNGEADIPFADILRARQAAVAGLGG
ASLPVAELRKRAEEALARLPAARIDTLHGVAKQIVDRHAIAMGLSPSARILDEEEAQALS
DLAVDEALSRALAEGGERAEAARALIAATGGVEAARSEVTRLLDRLDEDGLAPRRLAVSD
HAAEAGALARELRRLAAESAALGSAAFRAPAAALAAALGREDGGAPFPASAASAPLIELL
TQRKPHKSKSTPADEALIAFREALPGETHRDKAQQLLGFLREAPALSRREARIVELLEEI
RERLSAIRRTEGGLGFGDLLRAARDGLRDDPAIGAAVRGSVDVLLVDEFQDTSAVQRDLV
YLLRERDDAALSRPAGVAPTAAGLSGHGLFLVGDRKQSIYGFRGADVSIFCRVCAELAGA
AAGRALELAPALWSPDPSADFVALRESRRSTPELLAFINAFSARDFAQDRGAGDGDAGAR
EVGSPPREFEIAYSAAEHLVAAPGRAAEGPTNVVLVSDGGGAPDGVDALVRDARGQLREA
LIAAAYIARRVRGAGGDGAAGGDGAATGDLRFRDVAVLTRRRSTIPLVELALARLEIPYV
VAGRALFDAAEVRDLAAILRLLLDPRDRLALATVLRGPVVALSDTSLALLAPPGRGLAVP
LLGRWPAAALAQGVWSPSPDDAELDDGRPLPVLARLPAGDRERLEAFRARYAGLRRAALR
STPGEAIRAAVTAFDLDRVLAALPRAQARLGNVDRLVSIARRRGGSLASFVRWLDRRIRD
EADEPEAAVFSPEDDAVRLTTIHASKGLDFPAVVLLDLNAEPRASQPGLSYVPAAGDRPA
ALLVRHYARIVDGRSRTGSLHDAEASARGPSFPVSTPALQAARAEVRARERAERQRLTYV
AITRARRELVLVGAEAKPRSGSAWLTLKAAVDAEPRAAAAVDAEPRIAAADVGVEAPTLA
GTLRATLDASSLLAGAKAPAPGTDAYARAAPAPRAPPAIGPARAQTVLVAAASLAAFQAC
PRRFRLRHLLGLGEPAGEGQLGLFDVEGPPELPGEERVELEDGADPRPPGRAVHRVLQRW
PRARWGEPTEPQDVAARLAFEGFPPHGPDVLRTAERVARFLDGPYARQVRGEEASLLREE
ALVLDVEPQRAGRRRGARLALSLAIDLAVLHPGGLIDVVEYKRARPRADLSPYELRLRAC
ALALRRRHPDRPVRAGVLFVGAEVEPVWLAASGPLGTLTDDEHARFERELARLAERFAEA
RAEDRFDGVPVEACRKLRCGFVRACHG
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcgccgcgcggcgcggagctcgccgagggcgacgcgctcatctacgccttc
cgccgcaacgtcgtggtcgccgcgagcgccggcaccggcaagacccaccgcctcacggcg
ctctacgtgctgctcacgctcggcctcacctccctcggcctgcccgatgccgcgtccgcc
gcgccgcccgtgccgccggaccgcatcgtcgcgacgacgttctcgcgcgccgcggcgcgg
gagatcgcccaccgcgtcgagcgctcgctccgcgagatcgcccgctggaacggcgaggcg
gacatccccttcgccgacatcctccgggcgcggcaggcggccgtcgccggcctcggcggc
gcgtcgctgcccgtcgccgagctgcgcaagcgcgcggaggaggcgctcgcccgcctcccc
gccgcgcgcatcgacacgctccacggcgtcgccaagcagatcgtggaccggcacgcgatc
gcgatggggctctcgccctcggcccggatcctcgacgaggaggaggcgcaggcgctcagc
gacctcgcggtcgacgaggcgctgagccgcgcgctcgccgaggggggcgagcgcgccgag
gccgcgcgcgcgctcatcgccgcgacgggcggcgtcgaggccgcgcggagcgaggtcacg
cggctgctcgaccggctcgacgaggacggcctcgcgccgcgccggctcgccgtgtccgac
cacgccgccgaggccggcgcgctcgcgcgggagctccgccgcctcgccgccgagagcgcc
gcgctcggcagcgccgccttccgcgcgccggcggcggcgctcgcggcggcgctcggccgc
gaggacggcggcgcgcccttccccgcgagcgcggcgagcgccccgctcatcgagctcctc
acgcagcgcaagccgcacaagagcaagtccacgccggccgacgaggcgctcatcgccttc
cgcgaggcgctgccgggcgagacccaccgcgacaaggcgcagcagctgctcggcttcctc
cgcgaggccccggcgctgtcgcgccgcgaggcgcggatcgtcgagctgctggaggagatc
cgcgagcggctctcggcgatccgccgcaccgagggcggcctcgggttcggggatctcctg
cgcgccgcccgcgacggcctgcgggacgatccggcgatcggcgcggcggtccgcggctcg
gtcgacgtgctgctcgtcgacgagttccaggacacgagcgcggtgcagcgcgatctcgtc
tatctcctgcgcgagcgggacgacgcggccctctcgcgcccggccggcgtggccccgacg
gcggccggcctgtccggtcatggcctgttcctcgtcggcgatcgcaagcaatccatctac
gggttccgcggggccgacgtctccatcttctgccgcgtctgcgcggagctcgccggcgcc
gccgcgggccgcgcgctcgagctcgcgcccgcgctctggtcgccggatccgagcgcggat
ttcgtggcgctccgcgagagccgccggtcgacgcccgagctgctcgcgttcatcaacgcc
ttctccgcgcgcgatttcgcccaggaccgcggcgcgggcgacggcgacgcgggcgcgcgc
gaggttggaagtccgccgcgcgagttcgagatcgcctacagcgcggcggagcacctcgtc
gcggcgccgggcagggccgcggagggcccgacgaacgtcgtgctcgtcagcgacggcggc
ggcgctccggacggggtcgacgccctggtccgggacgcgcgcggacagctgcgcgaggcg
ctgatcgcggcagcgtacatcgcgcggcgcgtccgcggcgcgggcggcgacggcgctgcg
ggcggcgacggcgccgcgaccggcgatctgcgcttccgcgacgtcgccgtgctcacccgc
cggaggagcacgatcccgctcgtcgagctcgcgctcgcgcgcctcgagatcccgtacgtg
gtggccggccgcgcgctcttcgacgcggccgaggtccgcgatctggccgcgatcctccgc
ctcctgctcgatccgcgcgatcgccttgccctggcgaccgtcctccgcggcccggtggtg
gcgctctccgacacgtcgctcgcgctcctcgcgcctcctggccgcggcctcgcggtcccg
ttgctcggccgctggccggccgccgcgctggcgcagggggtctggtcgccctccccggac
gacgccgagctcgacgacgggcgcccgctccccgtcctcgcgcgcctgcccgcgggcgat
cgcgagcgcctcgaggcgttccgcgcccgctatgccggactgcgccgcgcggcgctccgc
tcgacgccgggcgaggcgatccgcgccgcggtcaccgccttcgatctcgaccgcgtcctc
gcggcgctccctcgcgcccaggcccgcctcggcaacgtcgaccgcctcgtctccatcgcc
cgccgccggggcggctcgctcgcgagcttcgtccgctggctcgaccgccgcatccgcgac
gaggcggacgagcccgaggccgctgtcttctcgcccgaggacgacgccgtgcggctcacg
acgatccacgccagcaaggggctcgatttcccggccgtcgtgctcctggatctcaacgcg
gagccccgcgcgtctcagcctggcctgagctacgtccccgccgcgggggaccggcctgcc
gccctgctcgtgcgccactacgcgcggatcgtcgacgggcggtcgcggaccggctcgctc
cacgacgccgaggcgtcggcgcgcgggccgtcgttccccgtcagcacgcccgcgctccag
gcggcgcgcgccgaggtgcgggcgcgggagcgcgccgagcggcagcggctcacgtacgtc
gcgatcacgcgcgcccgccgcgagctcgtgctcgtcggcgccgaggcgaagccgcggagc
ggctcggcgtggctcacgctgaaggcggcggtcgacgccgagccccgggccgcggccgcg
gtcgacgccgagccccgcatcgccgcggcggacgtcggcgtcgaggcccccacgctcgcc
ggcaccctccgcgcgacgctcgacgccagctcgctgctcgccggggcgaaggcgcccgcg
cctggcaccgacgcgtacgcccgcgccgcgccggccccccgggcgccgccggcgatcggg
cctgcccgcgcgcagaccgtgctggtcgcggcggcgtcgctggcggcgttccaggcgtgc
ccgcgccgcttccggctgcgccacctcctcgggctcggcgagcctgccggcgagggccag
ctcggcctgttcgacgtcgagggcccgcccgagctcccgggcgaggagcgcgtcgagctc
gaggacggcgcggaccctcgccctcccggccgcgccgtgcaccgggtgctccagcgctgg
ccgcgcgcgcgctggggtgagccgaccgagccccaggacgtcgccgcccgcctcgccttc
gaggggttcccgccgcacggcccggacgtgctgcgcaccgcggagcgcgtcgcgcgcttc
ctggacggcccctacgcgcggcaggtgcgcggcgaggaggcgtcgctcctccgggaggag
gcgctcgtgctcgacgtcgagccccagcgcgccggacggcggcgcggcgcgaggctcgcg
ctctcgctcgccatcgatctcgccgtcctgcacccgggcggcctcatcgacgtcgtcgag
tacaagcgcgcgcgcccccgtgcggatctctcgccgtacgagctccgcctgcgcgcgtgt
gcgctcgcgctcaggaggcgccaccccgaccgccccgtccgcgcgggcgtgctcttcgtc
ggcgccgaggtcgagcccgtgtggctcgcggcctcgggccccctggggacgctcaccgac
gacgagcacgcgcggttcgagcgcgagctcgcccggctggccgagcgcttcgccgaggcg
agggccgaggatcgcttcgacggcgtccccgtcgaggcgtgccgcaagctgcgctgcggc
ttcgtgcgcgcctgccacggctag
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