Sorangium cellulosum So ce56: sce3280
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Entry
sce3280 CDS
T00634
Name
(GenBank) Sigma-54 dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scl03000
]
sce3280
Transcription factors [BR:
scl03000
]
Prokaryotic type
Helix-turn-helix
Other families
sce3280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
Mg_chelatase
AAA
GAF_2
HTH_8
AAA_2
HTH_30
AAA_3
GAF_3
AAA_22
IstB_IS21
MCM
Motif
Other DBs
NCBI-ProteinID:
CAN93439
UniProt:
A9GMH5
LinkDB
All DBs
Position
complement(4593430..4595025)
Genome browser
AA seq
531 aa
AA seq
DB search
MSNQQLRCTIDNMAKPNLEALLSVALDLTTSLGAEDRYRRLLEAVRHVVPCDAACLMRYQ
DGVLVPLAAHGLAPEALGRTFCTKAHPRLDILCHAEAPVRFAPDTELPDPFDGLLASDAT
ALAHVHACLGCPLRVEGTLIGLLTADARDPRAFEGVDAATLSWLGALAGAAVRTSQLIDA
LEHSAERLGLVADDLRRAAERERGASLLGTSPAMQRLRDEIALVGPSDLTVLITGETGVG
KELVARAVHAASGRRGEPLLHVNCAALPESVAESELFGHVRGAFTGAEQSRPGKLEVADK
GTLLLDEIGELPLSIQPKLLRALQEGEVQRVGADRSLRVDVRVVAATNRDIEREVAEGRF
RADLFHRLNVYRLAVPPLRERRSDIPLLAGHFCDEARARLGVGPVRLTKAARELLAAGAW
PGNVRELENTVFRMVLQASRGVPRGAPVVVKPAHLGVDVAAASEPAAREDDAEKATPAAA
AAPLNEQVDAFQRGLIERAVAQHDGNWAAAARSLGMHRSNLHHLAKRLGLR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaatcaacaactacgttgtacaatcgacaacatggcgaagccgaacctggaggcg
ctgctgtcggtcgcgctcgatctcacgacgtcgcttggcgccgaggatcggtaccggcgc
ctgctcgaggcggtgcggcacgtggtgccgtgtgatgcggcgtgcctgatgcggtatcag
gatggcgtgctggtgccgctcgcggcgcacgggctcgcgccggaggcgctggggcgcacg
ttttgcaccaaggcgcaccctcggctcgacatcctctgccacgccgaggcgccggtgcgc
ttcgcgccggacaccgagctgccggatccgttcgacgggctgctcgcgtcggacgcgacc
gcgctggcgcacgtgcacgcgtgcctcggctgtccgctgcgggtcgagggcacgctcatc
gggctgctgacggccgacgcgcgcgacccgcgcgccttcgagggggtcgacgcggcgacg
ctctcctggctgggcgcgctggccggcgcggcggtgcgcacgagccagctcatcgacgcg
ctcgagcacagcgccgagcggctcggcctggtcgccgacgacctccggcgggcggcggag
cgggagcggggcgcgagcctgctcgggacgagcccggcgatgcagcggctgcgcgacgag
atcgcgctcgtggggccgtcggatctcacggtgttgatcacgggcgagacgggcgtgggg
aaagagctcgtggcgcgcgccgtccacgcggcgtcggggcggcggggcgagccgctgctc
cacgtgaactgcgcggcgctgcccgagtcggtggcggagagcgagctgttcgggcacgtg
cgcggcgcgttcacgggggcggagcagagccggccggggaagctcgaggtggcggacaaa
ggcacgctgctcctcgacgagatcggcgagctgccgctgtcgatccagccgaagttgctg
cgggcgctgcaggagggcgaggtgcagcgggtcggcgccgatcggtcgctgcgcgtcgac
gtgcgcgtcgtggcggccacgaaccgcgatatcgagcgggaggtggccgaggggcgcttc
cgggccgacctgttccaccggctcaacgtctatcgcctcgcggtgccgccgctgcgcgag
cggaggagcgatatcccgctgctcgccggccacttctgcgacgaggcgcgcgcgcggctc
ggcgtcgggccggtgcggctgacgaaggcggcgcgcgagctgctcgcggccggcgcctgg
ccggggaacgtgcgcgagctggagaacacggtgttccggatggtgctgcaggcgtcgcgg
ggcgtgccccgcggggcgcccgtggtcgtcaagccggcccacctcggggtcgacgtcgcc
gcggcgtcggagcccgcggcgcgcgaggacgacgcggagaaggcgacgcccgccgcggcg
gcggcgccgctgaacgagcaggtcgacgcgttccagcgcgggctcatcgagcgggccgtt
gcgcagcacgacggcaactgggccgccgcggcgcgatcgctcgggatgcaccgcagcaac
ctgcaccacctcgcgaagcggctcgggctgcgctga
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