Sorangium cellulosum So ce56: sce4086
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Entry
sce4086 CDS
T00634
Name
(GenBank) conserved carbohydrate-binding protein, Rhs family
Organism
scl
Sorangium cellulosum So ce56
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
XOO_2897-deam
DUF6531
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
CAN94249
UniProt:
A9EVR3
LinkDB
All DBs
Position
5703079..5707182
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AA seq
1367 aa
AA seq
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MLASSFFDLVLGLDIHFEMVPTPAPLPLPIPNPFTGIIFDPMGLAAGLVLGNLMAAVSGA
PPTGPVVYWGFVPATNTGTEAIHIPGHILFPPGVAWAPFPKTPKPVIHPGEVPAPALPIK
PENDAICVFGSKTVTVMGSNAVRFGDILLSCSEPIRLPSSVVLAIPKGAPILIGGPPSLD
LMSAVMASLRTRFVSDSLHALVSRLRPSRFRNFLHRAVCFFTGHPVDVASGKVLTEAVDA
ELGGPMPFRVERIYSSACASRRGPLGHGWSLSLDQAIWTERGKVVLLAEDGREIEFDTFD
HPGHTMLPGEAVYHPIERLSLRCLGGSRWEVEARDGTVREFAPVPGRPEARAALQRIRSR
CRNHEIVLAYDARGRLEWVRDSAGRLVWLEHDDEDRLVALNLPLPRGRGFAAHRQYRYDD
QGDLVAVSDALGHEWRFEYVTHLLVRETDRNGLSFYFAYDGLGEDAFCVRTWGDGGIYDH
RLQYDKRGRVTVVTDSLGNTTRYYMNVVGLVTKIVDPLGGTTEYQVDPTTLQRTREVDPA
GVAVERRYDDRGNLIELADGVGSKVRLEYDRGGRPVRAVDALGGEWRWEYDENGSLVRRV
NPLGEATYLTWDRGLLVALALPDRRKIHVEYDEHKEIREIRSGGSGKSTYERDERGRLIA
ARDPRGAVVTTAYDAEGRTLERRSRSGAAERHRYDPEGHLVEIDSDARRIKLEYGHFHRL
VRRSEGGGEISFHYDSEGHLLAARNEYGEQYLFTYDASGNVATETRFSGGTWRYRRDAAG
RVGAAVDPAGSTSTMTYDAAGRLARVDHGDGTFLEFRYRADGELEWAQNEHSETSCHRDA
IGRILAEVQPAGRVASTYLPGGARHRIESSLGARCTIVHDAGLGARELHLGGGASPEAVI
AFTRDPMGAELSRLLPGGVELQWDRDIAGRPLARRTTRVDSGAARLDARAYEWRGEDQIA
AIVDAARGARTFEHDRAGRLLSERSPRGDVARPLRRFSADELAEERASARFGPGSRVIDH
AGVRYTYDAAGRLQTKERDGRRWSFHWNGHGLLRRVELPDGRAALFEYDAFARRTAKRIV
RCGSSGEEVVDSETRFLWDGHTLLHEISIKHGLTTWYWEPGLFAPVARERGGQVWSVIPD
HLGAPTTLFDTSGVQVWAAETDTLGRTAVEQGAPEDCPWRWPGQYEDPETGLYYNRFRYY
DPDAGNYVSPDPLGLLAGTAEYAYAPDSLVWFDPLGLIVLQQVPYNDHPLFGAVSEFIQG
KSRSDLRGRNVAAVLLDDGTVIVRASEGGGNHAERVLMGLSEVDPAKVVAVYTERSPCTG
RINCHDLLDSSLGADVPVYYTHEMIRGQEGKTAQQIEADRNQFCRGG
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctggccagcagcttcttcgacctggtcctcggcctggatatccacttcgagatggtg
cccacgcctgcgccgttgccgttgcccatcccgaacccgttcacgggcatcatcttcgat
ccgatggggctcgccgcgggcctcgtgctcggcaatctcatggccgctgtctccggcgca
ccgccgactggccctgtggtttactggggctttgttcccgcgaccaacacggggacggag
gccatccacatccccggccacatcctgttccctcccggggtcgcctgggcgccgttcccg
aagacgccgaagcccgtgatccaccctggtgaggtcccggcgcctgccctccccatcaaa
cccgagaacgacgcaatctgtgtgttcggctcgaagacagtgaccgtcatgggctcgaac
gccgtgcggttcggcgacatcctgttgagctgctccgagccgatccggttgccgtcttcc
gtcgtgctcgcgatcccgaagggagcgccgatcctgattggcggcccgccgtcgctcgac
ctcatgtcggcggtcatggcctcgctgcgcactcgcttcgtcagcgattcgctccatgcc
ttggtgagccggctccgtccgagccggtttcgcaatttcctgcaccgcgcggtgtgcttc
tttacaggccaccccgtcgacgtcgcatccggcaaggtcctcacggaggcggtcgacgcg
gagctcggcggaccgatgccgttccgcgtcgagcggatctattcctcggcgtgcgcctca
cggcgtgggcccctgggccacggatggagcctctccctggatcaggcgatctggaccgag
cgcggcaaggtggtcctgctcgccgaagacggccgggagatcgagttcgacacgttcgac
caccccggtcacacgatgctccccggcgaggcggtctaccatcccatcgagcggctgagc
ctccgctgcctgggtggcagccgctgggaggtcgaggcccgggacgggaccgtgcgcgag
ttcgccccggtgccggggcgcccggaggcgagggccgctctgcagcgcatccgctcgagg
tgcagaaaccacgagatcgtgctcgcatacgacgccagaggccgactcgagtgggtgcga
gactcggcggggcgactcgtctggttggagcacgacgacgaggatcgcctggtcgcgctg
aacctgccgctcccgcgaggtcgcggcttcgccgcacatcggcagtatcgctacgacgac
cagggcgacctcgtcgcggtcagcgacgcgctcgggcacgagtggcgcttcgagtacgtg
acgcacctgctcgtgcgcgagacggaccgcaacggcctgtcgttctatttcgcctacgac
gggctcggcgaggacgccttctgcgttcgcacgtggggagacggcgggatctacgatcat
cgcctccagtacgacaagcgcgggcgcgtgaccgtggtgaccgattcgctcgggaacacg
acccgctattacatgaacgtcgtcggtttggtgacgaagatcgtcgatccgctcgggggg
acgaccgaatatcaggtggatccgaccacgctacagcgcaccagggaggtcgatcctgca
ggcgtcgccgtcgaacggcgctatgacgatcgcgggaacctcatcgagctcgccgacggg
gtgggctcgaaggtgcggctggagtacgatcgcggcggtcgacccgtccgtgcagtcgac
gccctgggcggcgagtggcgatgggaatacgatgagaacggtagcctcgtgcgccgcgtg
aatccgctgggcgaggcgacgtacctcacctgggaccgcggcttgctggtggcgctggcg
ctcccggatcgccgaaagatccacgtcgagtacgatgaacacaaggagatccgcgagata
cgctcgggtggcagcgggaagagcacctacgagcgcgacgagcgggggcgtctgatcgcc
gcacgcgatccccgcggcgcggtcgtcacgacggcctacgacgccgaggggcgcacgctc
gagcgacgatcccgaagcggcgccgcggagcgacatcggtacgaccccgagggccacctc
gtcgagatcgacagcgacgcgcgtcggatcaagctcgagtatggtcacttccaccgcctc
gtccggcggagcgagggcggcggggaaatcagctttcactatgacagcgaaggtcacctg
ctggcggcccggaacgagtacggagagcagtacctgttcacctacgacgcgagcggcaac
gtcgcgacagagacgcgcttcagcggtgggacatggcgctaccgccgagacgccgccgga
cgcgtgggcgccgccgtagacccggcggggagcacgtcgacgatgacctacgacgccgcg
gggcggctcgcccgggtggaccacggcgacggcacgttcctcgagttccgataccgcgcc
gacggcgagctcgaatgggcccaaaacgagcactccgagacatcgtgccatcgcgacgcg
atagggcgcatccttgccgaggtgcagccggctggacgcgtcgcatccacgtatctcccg
ggcggcgcgcggcatcgaatcgagtcctcgctcggcgccaggtgcactatcgtccacgat
gccgggctgggtgcgcgcgagcttcacctgggcggcggggcgtcgcccgaggcggtcatc
gccttcacccgggatcccatgggggcggagctgtcccgcctcctgcctggaggtgtcgag
ctgcaatgggaccgtgacatcgcaggacggcctctcgcgagacggacaacccgggtcgac
agcggcgccgcgcgtctcgacgcccgcgcgtacgagtggcgaggcgaggaccagatcgcc
gcgatcgtggacgcggctcgtggtgcacgcacattcgagcatgatcgtgcaggccgtctg
ctgagcgaacgttcgcccaggggcgatgtcgcgcgacctctccggcgcttcagcgcggac
gagctcgccgaggagcgagcctctgcgcgcttcgggcctggcagccgggtcatcgaccat
gcgggcgtcaggtacacctacgatgcggctggccgcctgcaaacgaaggagcgtgacggc
cggcggtggtcgtttcattggaacggtcacggtctgctccggcgcgttgagctgccggac
ggtcgggcggcgctcttcgagtacgacgcgttcgcgcggcggacggcgaagcggatcgtc
cgctgcgggagctcgggagaagaggtggtggattcggagacgcggttcctgtgggacggc
cacaccctcctccacgaaatctcgatcaagcatggtcttacgacgtggtactgggagccc
ggtctgttcgcgccagtcgctcgcgagcgcggtggtcaggtatggagcgtgatccccgat
cacctgggcgcgccgacgaccctgttcgacaccagcggcgtccaggtatgggctgccgaa
acggacacgctcggacgcaccgccgtcgagcagggcgccccggaggattgcccctggcgg
tggcccgggcaatatgaggatcccgagaccggcctgtattacaaccgcttccgctactac
gatcccgacgcgggcaattacgtctcccccgatcccctgggtctgctcgccgggaccgcg
gagtacgcttatgcccccgacagcctggtgtggttcgacccgctcggcctgatcgtgctg
cagcaagttccgtacaacgaccatcccttgttcggcgctgtctctgagttcatccagggg
aagagccggagcgaccttcgcggtcgcaacgtggctgccgtcctgctcgatgacggaacg
gtcatcgtgcgcgccagcgaagggggcggcaatcacgccgagcgggtgctcatgggcttg
tcggaggtggacccggcgaaggtcgtggccgtctacacggagcggtccccttgcacgggt
cgcatcaactgccacgatttgctggactcgagcctgggcgcggacgtgccggtgtactat
acacacgagatgattcgaggtcaggaaggcaagaccgctcagcagatcgaggcggatcgc
aaccaattttgtcgaggaggatag
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