Sorangium cellulosum So ce56: sce4213
Help
Entry
sce4213 CDS
T00634
Name
(GenBank) hypothetical carbohydrate-binding protein, Rhs family
Organism
scl
Sorangium cellulosum So ce56
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Tox-PAAR-like
DUF6531
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
CAN94376
UniProt:
A9EX36
LinkDB
All DBs
Position
5960722..5964873
Genome browser
AA seq
1383 aa
AA seq
DB search
MGKVTALHMDTITEKSGHQMTGMAVSVCLTPAAPSPLPIPYPTMGTVAEGIIDPCMRTKI
EGAKILTVGGCMKACHGNEPGTLKEVVSLNTGGPCFPWLGAPNVIIELGMAGITGSMGQM
NKSITVGAGASASGAGGGGGGGGGGGGGAGGPPGGSPQGGGNGGGGGGGSNSGAAPPSPP
APPGAEGQAAAGHPIDVVTGTLFTIPAADFTLTGFLWVQWIRTYSTSAVRHRCGLGWGWS
HSLAWRAERNGDHLVLVDDQQRRTEMRLPAAGEALLLPHGRKVHLDGDAIVVDLGDDLAR
ILRPTADPRAYALAELRDAFGNAATVEWDHDEVVAITDSVGRRAEVSRDGNLRIWSVAVA
DEGGKEHRRRLVTYELDGRGDLVRVIDVGGAETRFSYDDEHYLRSETRADGVVFHFVYQD
AGGERRCVETWGELPGGDLLAALGAPEAHAAGGPRGLFHTRVAYGPEPHQTTVTDALGHV
HRYQGNALGLVERYVDPRGYSMLFTYDGVGRLIAVTDGAGATQRRRHDLAGRLISLSDGG
GTVRYQTDDERQGVTTIAPNGHRSTERRSRGRVVEIEDARGKTTAEYDARGKNTKITYPS
GLVDTLEYDAHGNLVRYAQGERVWTYVYDLLGMPVRIESPGGAVTSLEYDSSGNIVSAVG
PSGQRTEHAFDGLGLCTATSYPGGGRAHYRYVASALVEQVLPDGSRWTMGYDALLRLSWM
QNAAGERRSFEYDASGNLVRETTFTGLQYRYEYDGADRLVSILRPDESIVRLSRDGAGNV
VAREYSSGLVERFEYDALGRVARATNGACTTELAYDERGAILRDTQTCGGFKFVTSYDYD
EGGQLVARRYSSGWRVALEHDAYGRVAAMGVGHPDAAERFVFERDEQDGERARRRDGGAG
AILTRRNAEGFPVEIQVEGAPGDVVRSRAYRWHPVGALAAVIDSERGERRYELDAHGRPV
DVRGLGATEAFSYSPHGTAIARGEASVGAGGRPRAAGDQVLTWDRLGRLSGRDAPDPRRT
WRYAFDENDRLTEAVRGDGLKIQYIYDALGRRVAEIVGQGSTWFGWDGDSIVEERSSGGQ
VTRRVFDASGHVPLLESQGGAGFRLVATDAAGTPWLTLDAAGEITELDLTTWGEVAHERG
EPGALRFAGQRADELTGLHYNRYRYYAPDLRVFITPDPIGLSGSLQEIGFVPNPTLFIDP
LGLLTIITASNDPKLHNAYYSQYAAKYPGATILKPNQVVPGSLKGETDVVVDTHGWPGSV
EWAGKKISGAQLADKLNAAGFNGKMPGARVEVVTCNGGTKPNFMGRSVAQAVADRTGATT
SGATAKGVPGVASAGAMGNAGASGLVSGMPTGLGSGNAPGGLHVSGGGHLIKDIKPRWYT
FGQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggtcactgccctccacatggacaccatcaccgagaaatccggtcaccagatg
accggtatggcggtgagcgtgtgtctgaccccggccgcgcccagcccgttgccgatcccc
taccccaccatgggcaccgtcgcggaggggatcatcgacccgtgcatgcgcacgaagatc
gagggcgcgaagatcctcaccgtcggcggctgcatgaaggcgtgccacggcaacgagcct
ggcacgctcaaggaggtcgtcagcctcaacaccggcgggccttgcttcccgtggctcggc
gcgccgaacgtcatcatcgagctcggcatggccggcatcaccggcagcatgggccagatg
aacaagagcatcaccgtcggcgccggcgccagcgcgagcggcgcaggcgggggcggcggc
ggcggagggggcggcggcggcggcgccgggggcccgcccgggggcagcccgcaaggcggc
ggcaacggcggcggaggcggcggcgggagcaacagcggcgccgcgccgccgagcccgcct
gcgccgccgggcgccgagggccaggcggccgcgggccatcccatcgacgtcgtgacaggg
acgctgttcacgatcccggcggccgacttcacgctcaccgggttcctctgggtccagtgg
atccgcacctacagcacctcggccgtgcgccaccgctgcggcctcgggtggggctggtcg
cacagcctcgcctggcgcgccgagcgcaacggcgatcacctcgtcctcgtcgacgaccag
cagcgccgcaccgagatgcggctgcccgcggccggtgaagcgctgctcctcccccacggc
cggaaggtgcacctcgacggggacgcgatcgtcgtcgacctcggcgacgacctcgcgcgg
atcctccggcccaccgcggatccgcgggcgtacgcgctcgccgagctgcgcgacgccttc
ggcaacgcggccacggtcgagtgggatcacgacgaggtcgtggccatcaccgactcggtc
ggccgccgcgcggaggtctcccgcgacgggaacctgcgcatctggtccgtcgccgtcgcg
gacgagggcggcaaggagcaccgccggcgcctcgtgacctacgagctcgacgggcgcgga
gacctcgtccgcgtcatcgacgtgggcggcgcggagacccggttcagctacgacgacgag
cactacctgcgctcggagacgcgggccgacggcgtcgtcttccatttcgtgtaccaggac
gcgggcggcgagcggcgctgcgtggagacctggggcgagctgcccggcggcgacctcctc
gccgcgctcggcgcccccgaggcgcacgcggccggcggtccccgcggcctcttccacaca
cgcgtcgcgtacgggcccgagcctcaccagacgacggtgacggacgcgctcggccacgtg
catcgctaccagggcaacgcgctcggcctcgtcgagcgctacgtcgacccgcgcggctac
tccatgctgttcacgtacgacggggtcgggcgcctcatcgccgttaccgacggcgccggg
gccacgcagcgacgccgccacgatctcgccggacggctgatctccctcagcgacggcggc
ggcacggtccggtaccagacggacgacgagcggcagggcgtcaccaccatcgccccgaac
ggccaccgctccaccgagcggcgcagccgggggcgcgtcgtcgagatcgaggacgcgcgc
ggcaagacgacggccgagtacgacgcgcgcggcaagaacacgaagatcacgtacccgagc
ggcctcgtcgacacgctcgagtacgacgctcacggcaacctcgtccgctacgcccaggga
gagcgcgtgtggacctacgtgtacgatctcctgggcatgcccgtgcgcatcgagtcgccc
ggaggcgcggtgacgtcgctcgaatacgactcctcgggcaacatcgtcagcgccgtgggg
ccgagcgggcagcgcaccgagcacgccttcgacgggctcgggctgtgcacggcgacctcg
taccccggcggcggccgcgcgcactaccgctacgtggccagcgcgctcgtcgagcaggtg
ctgccggacggctcgcgctggaccatgggctacgacgcgctcctccggctgagctggatg
cagaacgccgcgggcgagcggcgctcgttcgagtacgacgcgtccggcaacctcgtccgc
gagacgacgttcaccgggctccagtaccgctacgagtacgacggcgcggaccggctcgtg
tcgatcctccgccccgacgagtcgatcgtgcgcctctcgcgcgacggcgcgggcaacgtc
gtcgcgcgggagtactcgtcgggcctcgtcgagcgcttcgagtacgacgccctggggcgc
gtcgcgcgcgcgacgaacggcgcctgcacgacggagctcgcgtacgacgagcgcggcgcg
atcctgcgggacacccagacgtgcggcggcttcaagttcgtcacgagctacgactacgat
gagggcggccagctcgtggcgcgccggtactcgtccggctggcgcgtggcgctggagcac
gacgcgtacggacgggtcgccgcgatgggcgtcggccatccggacgctgccgagcgcttc
gtcttcgagcgcgacgagcaggacggcgagcgcgcccgccggcgcgacggtggcgccggc
gccatcctgacccggcgcaacgccgagggcttccccgtggagatccaggtggagggcgcg
ccgggcgacgtcgtccgctcccgcgcctaccgctggcacccggtcggggcgctggccgcc
gtgatcgacagcgagcgcggcgagcgccgctacgagctcgacgcgcacgggcggcccgtg
gacgtccgcgggctcggcgcgacggaggcgttctcctactcgccgcacggcacggcgatc
gcgcggggtgaagcgtcggtcggcgccggcgggcggccgcgcgcggcgggcgatcaggtc
ctgacctgggaccggcttggccggctctcgggccgggacgcgcccgatccgcggcgcacg
tggcggtacgccttcgacgagaacgatcggctgaccgaggccgtgcgcggcgacgggctg
aagatccagtacatctacgacgcgctcggccgccgcgtggccgagatcgtcggccagggg
agcacgtggttcggctgggacggcgacagcatcgtcgaggagcgctcctcgggcgggcag
gtcacgcgccgtgtcttcgacgcgtcaggccacgtgccgctgctcgagtcgcagggcggc
gcgggcttccgcctcgtggcgaccgacgccgcggggacgccgtggctcaccctcgacgcg
gccggcgagatcaccgagctcgatctcaccacctggggcgaggtcgcccacgagcgcggc
gagccgggcgcgctccgcttcgccgggcagcgcgccgacgagctcaccggcctccactac
aaccggtaccgctactacgcgcccgacctgcgcgtgttcatcacgccggatcccatcggc
ctctcgggctcgctgcaggagatcggcttcgtcccgaacccgacgctcttcatcgacccg
ctcgggctgctcacgatcatcacggcctcgaacgatcccaagctccacaacgcctactat
tcgcagtacgcggcgaagtacccgggcgcgacgatcctcaagccgaaccaggtcgtgcct
ggcagcctcaagggggagaccgatgtcgtcgtcgacacccacggctggccgggcagcgtc
gagtgggcggggaagaagatctcgggggcccagctcgcggacaagctgaacgccgccggg
ttcaacgggaagatgcctggagcgcgcgtggaggtcgtcacgtgcaacggcgggacgaag
ccgaacttcatgggccgcagcgtcgcccaggcggtcgcggaccggaccggcgcgaccacg
tccggcgcgacagcgaagggcgtccctggcgtggcctccgccggggcgatgggcaacgcg
ggcgcctccggcctggtcagcgggatgccgacgggactcgggtccggcaacgcgccgggc
ggcctgcacgtcagcggcggcgggcacctgatcaaggacatcaagccgcgctggtacacg
ttcgggcagtga
DBGET
integrated database retrieval system
