Sorangium cellulosum So ce56: sce4285
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Entry
sce4285 CDS
T00634
Symbol
truB
Name
(GenBank) probable tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scl03016
]
sce4285 (truB)
Enzymes [BR:
scl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
sce4285 (truB)
Transfer RNA biogenesis [BR:
scl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
sce4285 (truB)
Prokaryotic type
sce4285 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAN94448
UniProt:
A9F237
LinkDB
All DBs
Position
6057354..6058538
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AA seq
394 aa
AA seq
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MLVIDKPRGPTSHDVVARLRRALGVKRIGHAGTLDPMASGVLVVLVGEATKLAPYLTAQD
KRYTARVVLGVGTDTLDADGEITATQPLPPWLDAELGALAGAGGPPGGEALARAAPRIAA
AIDAERARREQSPPAYSAIKVAGQRSYALARAGQVVELSARAVEVRSLEVTGASRGVPGA
PAAGAAPAAGAAPATGAAPAAGAAPATGAAPAAGAAPATGAAPAAGAAPATGAAPATLDL
ELGVSKGYYVRSLARDLGAHLDVPAHLSALRRTASGSFTVEQAVSLDAGAEALRASLRPL
ADAAAASLPVARLTEHGARRARMGQALTESDFSMAPAHPGAAVWLDPDGAVVALGASEVA
DVDAGEGHPAPSPTRFSVLRGFSEAPDMRGNAAR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgatcgacaagccgcgcgggccgacgagccacgacgtcgtggcccgcctgcgc
cgcgccctcggcgtgaagcgcatcgggcacgcggggacgctcgacccgatggcgtccggc
gtcctcgtggtgctcgtcggcgaggccaccaagctcgccccgtacctgaccgcgcaggac
aagcgctacacggcgcgcgtcgtcctcggtgtggggacggacaccctcgacgcggacggg
gagatcaccgcgacgcagcccctgccgccgtggctcgacgcggagctcggcgccctcgcc
ggggccggcgggcctcccggcggcgaggcgctcgcgcgcgcggcgccgcgcatcgccgcc
gcgatcgacgcggagcgggcgcggcgggagcagtcgccgccggcgtactcggccatcaag
gtcgccgggcagcgcagctacgccctggcgcgcgccggccaggtggtggagctgtcggcg
cgggccgtcgaggtccggtcgctcgaggtgaccggcgcctcgcgcggcgtgcctggtgca
cctgccgcgggcgccgcgccggccgcgggcgctgcgccggccacgggcgccgcgccggcc
gcgggcgctgcgccggccacgggcgccgcgccggccgcgggcgctgcgccggccacgggc
gccgcgccggccgcgggcgctgcgccggccacgggcgccgcgccggccaccctcgatctc
gagctcggggtgagcaagggctattacgtgcgctcgctggcgcgcgacctgggcgcgcac
ctcgacgtgcccgcgcacctgtccgcgctccgccgcacggcgagcggcagcttcaccgtg
gagcaggccgtgtccctcgacgccggcgccgaggcgctgcgcgcatcgctgcgcccgctc
gccgacgcagccgccgcgagcctcccggtcgcccgcctgaccgagcacggcgcccggcgc
gcgcgcatgggacaagcgctcaccgaatccgacttctccatggctcctgcgcaccctggc
gccgctgtatggctcgatccggacggggctgtcgtggcgctcggcgcctcggaggtcgcc
gatgtggacgccggtgagggccatccagcgccatcgccgactcggttttccgtcctgcgc
ggtttttctgaagcgcccgacatgcgtgggaatgctgctagataa
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