Sorangium cellulosum So ce56: sce4816
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Entry
sce4816 CDS
T00634
Symbol
pelB
Name
(GenBank) High confidence in function and specificity
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl00040
Pentose and glucuronate interconversions
scl01100
Metabolic pathways
scl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
sce4816 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sce4816 (pelB)
Enzymes [BR:
scl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
sce4816 (pelB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CAN94979
UniProt:
A9FFD6
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All DBs
Position
complement(6769668..6770960)
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AA seq
430 aa
AA seq
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MKCESGVAWAALIALGILGVSVVGCGSETSEPEDDAGQPTSSGSAGSTASVGAAGTGGSG
AGSGAGNSSGGTGGSGSGEGGSGSGEGGSDEGTGGSSSGEGGSDEGNGGSSSGAGGSGSG
AGGGDPGAVDFRLYGYATTGDGTTGGKGGQVVSVSSLDALRREAARDGAVIIQITGKISG
SGDDVDVTSDKTIVGVGSSGELEGIGLNLRRASNIIVRNLKIHHVLASSGNGDGIHMDES
HNVWIDHCELWAESPAVNSDKDKYDGLIDATHESSNITISWSYLHDHWKGMLVGSSDNDD
SDRRITFHHNRFRNVNSRVPSYRGGNGHVFNNYFEDVPTSGVNSRVGACLRVEGNHFYKV
KNPITTLDSPAGGTHRIDNVFEQTTGTQASGQDCSWTAPYEYPLDRAAAVKALVLEHAGV
GKTDPLANLP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgaatctggagtcgcttgggctgcgctgatcgcgctcggcatcctcggcgtt
tcggtggtcgggtgcggctcggagacgtcagagccggaagacgacgcggggcagccgacg
agcagcgggagcgcaggctccacggcgagcgtcggcgccgccgggaccggtgggagcggc
gcgggcagcggcgcgggcaactccagcggcgggaccggcggctccggcagcggtgagggc
ggctccggcagcggtgagggcggctcggacgaaggcaccggcggctccagcagcggtgag
ggcggctcggacgaaggcaatggcggctcgagcagcggcgccggcggctccggcagcggc
gccggcggcggcgaccctggcgcggtcgacttcaggctctacggctacgccacgaccggc
gacggcaccaccggcggcaagggcggacaggtcgtctccgtgagctcgctcgacgccctc
aggagggaggccgcgcgggacggcgccgtgatcatccagatcaccggcaagatcagcggt
agcggcgacgacgtggacgtcacctccgacaagacgatcgtgggggtcgggtcgagcgga
gagctggaggggatcgggctcaatctgaggagggcctccaacatcatcgtccgcaacctg
aagatccaccacgtgctggccagcagcggcaacggcgacggcatccacatggacgagagc
cacaacgtctggatcgaccactgcgagctctgggccgagtctcccgccgtgaactccgac
aaggacaagtacgatggcctcatcgacgcgacccacgagtcctcgaacatcacgatctcg
tggagctacctgcacgaccactggaagggcatgctggtcggctcgtcggacaacgacgac
agcgaccgccgcatcaccttccatcacaaccgcttccgcaacgtgaactcccgcgtcccg
agctaccgcggcggcaacgggcacgtcttcaacaactacttcgaggacgtccccacgtcg
ggggtgaactcgcgggtcggcgcctgcctgagggtggagggcaatcacttctacaaggtg
aagaaccccatcaccaccctggacagcccggccggcggtacgcaccgcatcgacaacgtg
ttcgagcagaccaccgggacgcaggcgtcgggtcaagactgctcctggaccgcgccgtac
gagtacccgctcgaccgcgcggccgccgtcaaggcgctcgtcctggagcacgcgggcgtc
ggcaagacggacccgctggcgaacctgccctga
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