KEGG   Sorangium cellulosum So ce56: sce5014
Entry
sce5014           CDS       T00634                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl02020  Two-component system
scl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    sce5014
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    sce5014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scl03021]
    sce5014
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:scl02035]
    sce5014
Transcription machinery [BR:scl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     sce5014
Bacterial motility proteins [BR:scl02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    sce5014
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 HTH_23 Sigma70_r2 DUF6362 Sigma70_ECF
Other DBs
NCBI-ProteinID: CAN95177
UniProt: A9FL43
LinkDB
Position
7040025..7040759
AA seq 244 aa
MSHGDRPRRPLRPDQQALVAEAVPLVEKLCGHFLRRTRAHYVADDLRSAAVQALHEAALG
YDPARGVPFQVYAWRRVDGALSDALQQESKHWRAAREDGYDAAEAAQDTSDVLADGDAET
TAQADGMADQVAAAAVLGLVGRALTAQGEEGERLRATYDRAIRAVEAALSRLPDEERRVL
VLRHVEERTWQAIGAALGCSERTAKRRSAEAQKRFAGALRADRQRAQGGAAAPERVGLAG
ATSG
NT seq 735 nt   +upstreamnt  +downstreamnt
atgagccacggcgaccggccgcggaggcccctccgccccgaccagcaggcgctcgtcgcg
gaggccgtgccgctcgtcgagaagctctgcggccacttcctccggcggacgcgcgcgcac
tacgtggccgacgatctccgctccgccgcggtccaggcgctccacgaggccgcgctcggc
tacgatcccgcccgcggcgtccccttccaggtctacgcctggcggcgcgtcgacggcgcg
ctgtcggacgcgctgcagcaggagtcgaagcactggcgcgctgcccgcgaggacggctac
gacgccgccgaggcggcgcaggacacgagcgacgtgctcgccgacggcgacgccgagacg
accgcgcaggccgacgggatggccgaccaggtcgcggccgccgcggtgcttggcctcgtc
ggccgcgcgctgacggcgcagggcgaggagggcgagcggctccgcgccacgtacgaccgc
gccatccgcgcggtggaggccgccctgtcgcggctcccggacgaggagcggcgcgtcctc
gtgctccgccacgtcgaggagcggacctggcaggcgatcggcgcggcgctcggctgctcg
gagcggaccgcgaagcggcgcagcgcggaggcccagaagcggttcgccggcgcgctgcga
gcggaccggcagcgcgcgcagggcggcgccgccgcgccggagcgggtcgggctggctggc
gcgacgtccgggtag

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