Sorangium cellulosum So ce56: sce5115
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Entry
sce5115 CDS
T00634
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scl03032
]
sce5115 (topA)
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce5115 (topA)
Enzymes [BR:
scl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
sce5115 (topA)
DNA replication proteins [BR:
scl03032
]
Prokaryotic type
DNA Topoisomerases
sce5115 (topA)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
sce5115 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Zn_ribbon_recom
zf-ribbon_3
Toprim_2
RNA_POL_M_15KD
DUF1272
Motif
Other DBs
NCBI-ProteinID:
CAN95278
UniProt:
A9FRC6
LinkDB
All DBs
Position
complement(7182125..7184719)
Genome browser
AA seq
864 aa
AA seq
DB search
MAKTLVIVESPAKAKTIKKYLGNGYEVFASKGHVKDLPKKQNAVDVQNDFAETYEVIEGK
EKVLEELKSAAKKADEVLLATDPDREGEAIAFHISEEIKNPKLKVARVEFHEITKKGVDH
GVHNPRKLDENLYDAQRARRVLDRIVGYDVSALVWSKLAFGLSAGRVQSVALRLIVDRER
EVEAFVPEEYWNIAVGLGAASPPQRAPFVAKLASADGKKLEVTNGEVAGKVRADLETARY
RVAKVVRREQKRNPPAPYTTSKLQQDATNYLHFGAKRTMQIAQALYEGIDLKRDGGPVGL
ITYMRTDSTRVSDDAVAEVRGVVAKRYGKEFVPERPNVFKSKKNAQDAHEAIRPTSVEIH
PDSIKKHLKDEQYKLYKLIWNRFVASQMTPAVYDRTTVEIDVAPTLAAPAYRSYLARATG
RILKFAGWLQVTEGQQEFAGEEESAGAAADGGAAAPAPEATAAEAERAAPGPSAEEDSEA
LLPDMKEGEALSVSPPGVITDQKFTQPPPRYNEGSLVRELEKRGIGRPSTYAEIISKVQQ
RAYVEKRDGGAFQPTLLGKFVVDGLVRSNLDIMDPNFTAQMEEELDAVGAGSLKREQLLK
SFYKKFREQLDKSKKLAPWKPEAEKTDIVCDECGSMMLKKWGKNGWFLSCERYPKCKATR
DLSDARGTAAVRETDISCDKCGKPMIIKTGRFGDFLSCTGYPACKNTRPVPLGVACPSCG
GDLIEIRPRKKGGRTFYGCSNWNAEQKCEFKLWQKPVPVPCPQCGAKFVTRTAGKKAMLV
CATKDCGFKQEIVEGEGEDGAADGAATPDAAAVVASAAPAPAARPAPAEPTPAGRPEAAP
EGAGAAQGAAEKPARAVRARRTAS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgctcgtcatcgtggagtcgccggcgaaggcgaagaccatcaagaaatat
ctcggcaacgggtacgaggtgttcgcctcgaaggggcacgtcaaggacctgcccaagaag
cagaacgccgtcgacgtacagaacgattttgccgagacctacgaggtcatcgagggcaag
gagaaggtcctggaggagctgaagtccgccgcgaagaaggcggacgaggtgctcctggcg
accgaccccgatcgcgaaggggaggcgatcgcgttccacatctcggaggagatcaagaac
ccgaagctgaaggtggcgcgggtcgagttccacgagatcacgaagaagggggtcgaccac
ggcgtccacaacccccgcaagctcgacgagaacctgtacgacgcgcagcgggcgcggcgc
gtgctcgaccgcatcgtcggctacgacgtctcggcgctcgtgtggtcgaagctcgcgttc
ggcctgtcggctgggcgggtgcagtcggtcgcgctgcggctcatcgtggaccgcgagcgc
gaggtcgaggcgttcgtcccggaggagtactggaacatcgcggtcggcctcggcgcggcg
agcccgccgcagcgcgccccgttcgtcgcgaagctcgcctccgccgacggcaagaagctc
gaggtgacgaacggcgaggtcgctgggaaggtccgcgccgacctcgagaccgcccgctac
cgggtggcgaaggtcgtgcggcgcgagcagaagcgcaacccgcccgcgccgtacaccacc
tcgaagctccagcaggacgcgacgaactacctgcacttcggcgccaagcggacgatgcag
atcgcccaggcgctctacgagggcatcgacctcaagcgcgacggcggcccggtcggcctc
atcacgtacatgcgtaccgactcgacgcgcgtcagcgacgacgcggtcgccgaggtgcgg
ggcgtggtcgcgaagcggtacggcaaggagttcgtccccgagcgcccgaacgtcttcaag
tcgaagaagaacgcgcaggacgcgcacgaggcgatccggccgacgagcgtcgagatccac
ccggactcgatcaagaagcacctcaaggacgagcagtacaagctgtacaagctcatctgg
aaccgcttcgtcgcctcgcagatgaccccggccgtctacgaccgcacgacggtcgagatc
gacgtcgcgccgacgctcgcggcgcccgcgtaccggagctacctcgcccgggcgaccggg
cggatcctcaagttcgccggctggctgcaggtgaccgagggccagcaggagttcgccggc
gaggaggagagcgcaggcgccgccgcggacggcggcgccgcagcgccggcgcccgaggcg
accgccgccgaggcggagcgcgcggcgccggggccgtcggccgaagaggactcggaggcg
ctcctgcccgacatgaaggagggcgaggcgctctccgtgtcgcccccgggcgtcatcacc
gaccagaagttcacgcagccgccgccccgctacaacgagggctcgctcgtgcgcgagctg
gagaagcgcggcatcggccgcccgtcgacgtacgccgagatcatcagcaaggtgcagcag
cgcgcgtacgtcgagaagcgggacggcggcgcgttccagccgacgctcctcgggaagttc
gtggtcgacggcctcgtccggtcgaacctcgacatcatggatccgaacttcacggcgcag
atggaggaggagctcgacgccgtcggcgccggcagcctgaagcgcgagcagctgctcaag
agcttctacaagaagttcagggagcagctcgacaagtcgaagaagctcgcgccgtggaag
cccgaggccgagaagaccgacatcgtctgcgacgagtgcgggtcgatgatgctcaagaag
tggggcaagaacggctggttcttgagctgcgagcgctacccgaagtgcaaggcgacgcgc
gacctgtccgacgcgcgggggaccgccgccgtccgcgagaccgacatctcgtgcgacaag
tgcgggaagccgatgatcatcaagacgggccgcttcggcgacttcctgtcgtgcaccggg
tacccggcctgcaagaacacgcgcccggtcccgctcggcgtcgcgtgcccgagctgcggc
ggcgatctcatcgagatccggccgcgcaagaagggcgggcgcaccttctacggctgctcc
aactggaacgccgagcagaagtgcgagttcaagctctggcagaagccggtgccggtcccg
tgcccgcagtgcggcgcgaagttcgtcacccgcaccgccggcaagaaggcgatgctcgtc
tgcgcgacgaaggactgcggcttcaagcaggagatcgtcgagggggaaggggaggacggc
gccgccgacggcgccgccaccccggacgccgcggcggtcgtcgcgagcgccgccccggcg
ccggccgcccggcccgcgccggcggagcccacgccagccggcaggcccgaggccgcgcca
gagggcgctggtgcggcccagggggccgccgaaaagcccgcgcgggccgtgcgcgcccgc
cgcacggcgagctaa
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