Sorangium cellulosum So ce56: sce5400
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Entry
sce5400 CDS
T00634
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
sce5400 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce5400 (xseB)
Enzymes [BR:
scl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
sce5400 (xseB)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
sce5400 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
MscS_porin
Spidroin_MaSp
DUF2443
Motif
Other DBs
NCBI-ProteinID:
CAN95563
UniProt:
A9FXY7
LinkDB
All DBs
Position
7594353..7594661
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AA seq
102 aa
AA seq
DB search
MAKPKRGTKELSDGDTASPQRATKEVSYGEASSRLEEILQNIEEGQVDIDALSALVKEAA
DLVTLCRQKIHAAEIQVQTITEQLEREAPVTTDADDEDEDDE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagccgaagcgcgggacgaaggagctgtccgacggggacacggcaagcccgcag
cgcgccacgaaagaggtctcgtatggcgaggcgtcgtcgcgcctcgaggagatcttgcag
aacatcgaggaaggccaggtcgacatcgacgcgctctccgcgctcgtgaaggaggccgcg
gatctggtgacgctctgccgccagaagatccacgccgcggagatccaggtgcagaccatc
accgagcagctcgagcgcgaggcgccggtgaccacggacgcggacgacgaagacgaggac
gacgagtag
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