Sorangium cellulosum So ce56: sce5460
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Entry
sce5460 CDS
T00634
Name
(GenBank) Collagen alpha 2(I) chain precursor
KO
K06236
collagen type I alpha
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl04518
Integrin signaling
scl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
sce5460
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
sce5460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scl00536
]
sce5460
Glycosaminoglycan binding proteins [BR:
scl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
sce5460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
CAN95623
UniProt:
A9FYI7
LinkDB
All DBs
Position
7686963..7689632
Genome browser
AA seq
889 aa
AA seq
DB search
MASAGASWAGDSRDVKAEAGASDEVGHHVPGKGKGFVGQQYQQYQKGERGPQGPMGQRGP
AGPQGERGPQGPQGPKGERGEPGPQGPAGTAGAAGLIGPQGLQGFKGVDGARGPQGPQGP
KGERGEPGPQGPAGTAGLIGPQGLQGFKGVDGARGPQGPKGERGERGPQGPAGTAGLIGP
QGLQGLQGFKGVDGARGPQGPAGPMGPKGEMGPQGPAGHTGLQGLKGVDGARGPQGPAGP
MGPKGERGEPGRQGPAGTAGLIGPQGLQGLKGVDGARGPQGPAGLMGPKGEMGPQGPAGH
TGLQGLKGADGARGPQGPVGPKGEMGPQGPVGPKGEMGPRGPVGPKGVDGARGPQGPAGP
KGERGEPGPQGLAGHVGPQGLQGLKGVDGAPGLKGADGARGPQGPAGPKGEVGPQGPMGP
KGERGERGPAGIVGPQGLQGLKGADGAHGLKGADGAPGLKGADGARGPQGPAGPKGEVGP
QGPMGPKGERGERGERGPAGIVGPQGLQGLKGADGAHGLKGADGAPGLKGADGARGPQGP
AGPKGEVGPQGPMGPKGERGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGP
AGPKGEVGPQGPAGPKGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGPAGP
KGEVGPQGPAGPKGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGPAGPKGE
VGPQGPAGPKGERGERGERGERGPAGIVGPQGLQGLKGIDGAHGLKGADGARGPQGLAGP
KGERGPQGPAGAPGLVKIRVVSVTREASPTSAFVNVKALCDAGEVVLSGGFSISGGAQAT
SRVVENSPFEPTEGRAGWTSTAVFESGFGKKAQTVSLTTFAVCAELSER
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcaggcgcgagctgggccggcgattcgcgagacgtcaaggcggaggccggt
gcgtccgacgaggtcgggcaccacgtgcccggcaagggcaaggggttcgtgggacagcag
tatcagcagtatcagaagggggagcgcggtccccaggggcccatggggcagcgggggccc
gctgggccgcagggcgagcgcggtccgcaggggccgcaggggcccaagggtgagcgcggc
gagcccggcccgcaggggccggcaggcaccgcaggcgccgcggggctcatcggtccccag
ggcctccagggcttcaagggcgtcgacggcgcgcgcggtccccaggggccgcaggggccc
aagggcgagcgcggcgagcccggtccgcaggggccggcgggcaccgcggggctcatcggt
ccccagggcctccagggcttcaagggcgttgacggcgcgcgcggtccgcagggacccaag
ggcgagcgcggcgagcgcggtccccaggggccggcgggcaccgcggggctcatcggtccc
cagggcctccagggcctccagggcttcaagggcgtcgacggcgcgcgcggtccgcaggga
cccgcgggacccatggggcccaagggagagatgggtcctcaggggccggcggggcacacc
ggcctccagggcctcaagggcgtcgacggcgcgcgtggtccgcaggggcccgcgggaccc
atggggcccaagggcgagcgcggcgagccgggccggcaggggccggcaggcaccgcgggg
ctcatcggtccccagggcctccagggcctcaagggcgtcgacggcgcgcgcggtccgcag
ggacccgcgggactcatggggcccaagggcgagatgggtcctcaggggccggcggggcac
accggcctccagggcctcaagggcgctgacggcgcgcgtggtcctcaggggccggtaggg
cccaagggcgagatgggtcctcagggaccggtagggcccaagggcgagatgggtcctcgg
gggccggtaggccccaagggcgttgacggcgcgcgcggtccgcaggggccggcagggccc
aagggcgagcgtggcgagcccggcccccagggcctcgcagggcacgtcggtcctcagggc
ctccagggcctcaagggcgtcgacggcgctccgggcctcaagggcgctgatggcgcgcgt
ggtcctcagggtcccgctggacccaagggtgaggtcggtcctcaggggcccatgggaccc
aagggcgagcgcggcgagcgtggccccgcgggcatcgtcggtcctcagggcctccagggc
ctcaagggcgccgacggcgctcacggcctcaagggcgccgacggcgctccgggcctcaag
ggcgctgacggcgcgcgcggtccgcagggtcccgctggacccaagggtgaggtcggtcct
caggggcccatgggacccaagggcgagcgcggcgagcgcggcgagcgtggccccgcgggc
atcgtcggtcctcagggccttcagggcctcaagggcgccgacggcgctcacggcctcaag
ggcgccgacggcgctccgggcctcaagggcgctgacggcgcgcgcggtccgcagggtccc
gctggacccaagggtgaggtcggtcctcaggggcccatgggacccaagggcgagcgcggc
gagcgcggtgagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaag
ggcgtcgacggcgctcacggcctcaagggcgccgacggcgcgcgcggtccgcagggtccc
gctggacccaagggtgaggtcggtccccaggggccggccggacccaagggcgagcgcggt
gagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcgtcgac
ggcgctcacggcctcaagggcgccgacggcgcgcgcggtccgcagggtcccgctggaccc
aagggtgaggtcggtccccaggggccggccggacccaagggcgagcgcggcgagcgcggc
cccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcgtcgacggcgctcac
ggcctcaagggcgccgacggcgcgcgcggtccgcagggtcccgctggacccaagggtgag
gtcggtccccaggggccggccggacccaagggcgagcgcggcgagcgcggcgagcgtggc
gagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcatcgac
ggcgctcacggcctcaagggcgccgacggcgcgcgcggtcctcagggcctcgctggaccc
aagggcgagcgtggcccccaggggccggccggagcgcctgggctcgtgaagatccgcgtg
gtctccgtgacgcgcgaggcgtcgcccacgagcgcgttcgtcaacgtcaaggcgctctgc
gacgcgggtgaagtcgtgctcagcggcggattctcgatctccggcggcgcccaggcgacg
agcagggttgtcgagaactcgccgttcgagcccaccgaaggccgcgcgggctggacatcg
accgccgtgttcgagagcggcttcggcaagaaggcgcagacggtgtcgctgaccaccttc
gccgtgtgcgccgagctgtccgagcgctga
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