Sorangium cellulosum So ce56: sce5460
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Entry
sce5460 CDS
T00634
Name
(GenBank) Collagen alpha 2(I) chain precursor
KO
K06236
collagen type I alpha
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
sce5460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scl00536
]
sce5460
Glycosaminoglycan binding proteins [BR:
scl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
sce5460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
CAN95623
UniProt:
A9FYI7
LinkDB
All DBs
Position
7686963..7689632
Genome browser
AA seq
889 aa
AA seq
DB search
MASAGASWAGDSRDVKAEAGASDEVGHHVPGKGKGFVGQQYQQYQKGERGPQGPMGQRGP
AGPQGERGPQGPQGPKGERGEPGPQGPAGTAGAAGLIGPQGLQGFKGVDGARGPQGPQGP
KGERGEPGPQGPAGTAGLIGPQGLQGFKGVDGARGPQGPKGERGERGPQGPAGTAGLIGP
QGLQGLQGFKGVDGARGPQGPAGPMGPKGEMGPQGPAGHTGLQGLKGVDGARGPQGPAGP
MGPKGERGEPGRQGPAGTAGLIGPQGLQGLKGVDGARGPQGPAGLMGPKGEMGPQGPAGH
TGLQGLKGADGARGPQGPVGPKGEMGPQGPVGPKGEMGPRGPVGPKGVDGARGPQGPAGP
KGERGEPGPQGLAGHVGPQGLQGLKGVDGAPGLKGADGARGPQGPAGPKGEVGPQGPMGP
KGERGERGPAGIVGPQGLQGLKGADGAHGLKGADGAPGLKGADGARGPQGPAGPKGEVGP
QGPMGPKGERGERGERGPAGIVGPQGLQGLKGADGAHGLKGADGAPGLKGADGARGPQGP
AGPKGEVGPQGPMGPKGERGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGP
AGPKGEVGPQGPAGPKGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGPAGP
KGEVGPQGPAGPKGERGERGPAGIVGPQGLQGLKGVDGAHGLKGADGARGPQGPAGPKGE
VGPQGPAGPKGERGERGERGERGPAGIVGPQGLQGLKGIDGAHGLKGADGARGPQGLAGP
KGERGPQGPAGAPGLVKIRVVSVTREASPTSAFVNVKALCDAGEVVLSGGFSISGGAQAT
SRVVENSPFEPTEGRAGWTSTAVFESGFGKKAQTVSLTTFAVCAELSER
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcaggcgcgagctgggccggcgattcgcgagacgtcaaggcggaggccggt
gcgtccgacgaggtcgggcaccacgtgcccggcaagggcaaggggttcgtgggacagcag
tatcagcagtatcagaagggggagcgcggtccccaggggcccatggggcagcgggggccc
gctgggccgcagggcgagcgcggtccgcaggggccgcaggggcccaagggtgagcgcggc
gagcccggcccgcaggggccggcaggcaccgcaggcgccgcggggctcatcggtccccag
ggcctccagggcttcaagggcgtcgacggcgcgcgcggtccccaggggccgcaggggccc
aagggcgagcgcggcgagcccggtccgcaggggccggcgggcaccgcggggctcatcggt
ccccagggcctccagggcttcaagggcgttgacggcgcgcgcggtccgcagggacccaag
ggcgagcgcggcgagcgcggtccccaggggccggcgggcaccgcggggctcatcggtccc
cagggcctccagggcctccagggcttcaagggcgtcgacggcgcgcgcggtccgcaggga
cccgcgggacccatggggcccaagggagagatgggtcctcaggggccggcggggcacacc
ggcctccagggcctcaagggcgtcgacggcgcgcgtggtccgcaggggcccgcgggaccc
atggggcccaagggcgagcgcggcgagccgggccggcaggggccggcaggcaccgcgggg
ctcatcggtccccagggcctccagggcctcaagggcgtcgacggcgcgcgcggtccgcag
ggacccgcgggactcatggggcccaagggcgagatgggtcctcaggggccggcggggcac
accggcctccagggcctcaagggcgctgacggcgcgcgtggtcctcaggggccggtaggg
cccaagggcgagatgggtcctcagggaccggtagggcccaagggcgagatgggtcctcgg
gggccggtaggccccaagggcgttgacggcgcgcgcggtccgcaggggccggcagggccc
aagggcgagcgtggcgagcccggcccccagggcctcgcagggcacgtcggtcctcagggc
ctccagggcctcaagggcgtcgacggcgctccgggcctcaagggcgctgatggcgcgcgt
ggtcctcagggtcccgctggacccaagggtgaggtcggtcctcaggggcccatgggaccc
aagggcgagcgcggcgagcgtggccccgcgggcatcgtcggtcctcagggcctccagggc
ctcaagggcgccgacggcgctcacggcctcaagggcgccgacggcgctccgggcctcaag
ggcgctgacggcgcgcgcggtccgcagggtcccgctggacccaagggtgaggtcggtcct
caggggcccatgggacccaagggcgagcgcggcgagcgcggcgagcgtggccccgcgggc
atcgtcggtcctcagggccttcagggcctcaagggcgccgacggcgctcacggcctcaag
ggcgccgacggcgctccgggcctcaagggcgctgacggcgcgcgcggtccgcagggtccc
gctggacccaagggtgaggtcggtcctcaggggcccatgggacccaagggcgagcgcggc
gagcgcggtgagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaag
ggcgtcgacggcgctcacggcctcaagggcgccgacggcgcgcgcggtccgcagggtccc
gctggacccaagggtgaggtcggtccccaggggccggccggacccaagggcgagcgcggt
gagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcgtcgac
ggcgctcacggcctcaagggcgccgacggcgcgcgcggtccgcagggtcccgctggaccc
aagggtgaggtcggtccccaggggccggccggacccaagggcgagcgcggcgagcgcggc
cccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcgtcgacggcgctcac
ggcctcaagggcgccgacggcgcgcgcggtccgcagggtcccgctggacccaagggtgag
gtcggtccccaggggccggccggacccaagggcgagcgcggcgagcgcggcgagcgtggc
gagcgcggccccgcgggcatcgtcggtcctcagggcctccagggcctcaagggcatcgac
ggcgctcacggcctcaagggcgccgacggcgcgcgcggtcctcagggcctcgctggaccc
aagggcgagcgtggcccccaggggccggccggagcgcctgggctcgtgaagatccgcgtg
gtctccgtgacgcgcgaggcgtcgcccacgagcgcgttcgtcaacgtcaaggcgctctgc
gacgcgggtgaagtcgtgctcagcggcggattctcgatctccggcggcgcccaggcgacg
agcagggttgtcgagaactcgccgttcgagcccaccgaaggccgcgcgggctggacatcg
accgccgtgttcgagagcggcttcggcaagaaggcgcagacggtgtcgctgaccaccttc
gccgtgtgcgccgagctgtccgagcgctga
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