Sorangium cellulosum So ce56: sce5550
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Entry
sce5550 CDS
T00634
Name
(GenBank) Sigma-54 dependent transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scl03000
]
sce5550
Transcription factors [BR:
scl03000
]
Prokaryotic type
Helix-turn-helix
Other families
sce5550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
HTH_8
AAA_2
AAA_7
AAA_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAN95713
UniProt:
A9G320
LinkDB
All DBs
Position
7815019..7816497
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AA seq
492 aa
AA seq
DB search
MPAARAAFPRAFAGLVRSRQRPYGAAQRHFVGLAPRTMTASADHALLLLADLGEASARAH
TEATLLPAVSAALSRHLPLRRLDLRRGAAAPGAPEVRRGAGGEALAVFALRDAEGAVGCA
TMALGGGAALDVSPALLEAMGRLLAVALRQVQVLGRVAAIARRAQGEKRTLKEELDRVAL
PREVVAVGPAMRAIFQQMVPLVARQDTTVLVRGETGTGKEVIARRIHALSRRAERPFLAV
NCGALPEGLVESALFGHERGAFTGATARHLGLFERASGGTLLLDEVGELPRAAQAKLLRV
LQEGEIERVGGEGAVRVSVRVIAATHRPLEDMVASTAFREDLYYRLQVFPIIVPPLRDRP
EDLEPLTRVIVEKVAASFGRTPPRVSAESMARLRAHGWPGNVRELENVIERSMVMSTGDE
LILSAPLSAAPGATGRVMTYREAAQRCIEDALRAAGGKIYGEDGAAAALGLKPTTLQSKM
RKLGIRKDGEKG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcggcccgagcggcttttccccgggctttcgccggccttgtgcggtccaggcaa
cgcccctacggtgccgcgcaacgccatttcgtcggcctcgctccgcgcacgatgaccgcc
tccgccgatcacgccctcctcctgctcgccgacctcggcgaggcctcggcccgcgcgcac
accgaggcgacgctcctccccgcggtgagcgccgcgctctcgcgccatctcccgctgcgg
cggctcgatctgcgccgcggcgcggccgcgccgggcgcgccggaggtccggcgcggcgcg
ggcggcgaggcgctcgccgtcttcgcgctccgcgacgcggagggcgccgtcggctgcgcc
acgatggcgctcggcggcggcgcggcgctcgacgtctcgcccgccctgctcgaggcgatg
ggtcgcctgctcgccgtggcgctgcggcaggtgcaggtcctcgggcgcgtcgcggccatc
gcgcgccgcgcgcagggggagaagcggacgctcaaggaggagctcgatcgcgtcgccctg
ccgagggaggtggtcgcggtgggcccggcgatgcgggcgatcttccagcagatggtgccg
ctcgtcgcgcggcaggacacgacggtgctggtgcgcggcgagacgggcacgggcaaggag
gtgatcgcccgccgcatccacgcgctgtcgcgccgcgcggagcggccgttcctcgcggtc
aactgcggagcgctgcccgagggcctcgtcgagagcgccctgttcggccacgagcgcggc
gcgttcacgggcgccacggcgcggcacctcgggctgttcgagcgcgcgagcggcgggacg
ctgctgctcgacgaggtcggcgagctgcccagggcggcgcaagcgaagctcctgcgcgtg
ctccaggagggcgagatcgagcgcgtcggcggcgagggcgcggtgcgcgtctcggtgcgc
gtgatcgccgcgacgcaccggccgctcgaggacatggtcgcgagcaccgcgttccgcgag
gacctctattatcgtctgcaggtattcccgatcatcgtccccccgctgcgggaccggcca
gaggacctggagccgctcacgcgcgtcatcgtggagaaggtggcggcgagcttcggccgg
acgccgccgcgggtcagcgcggagtcgatggcgcggctgcgggcgcacggctggccgggc
aacgtgcgggagctggagaacgtgatcgagcggtcgatggtgatgtcgacaggagacgag
ctcatcctttcagcgccgctctccgcggcgcccggcgcgacagggcgcgtgatgacgtac
cgagaggcggcgcagcgctgcatcgaggacgcgctgcgggccgcgggcgggaagatctac
ggagaggacggggccgcagcggcgctggggctgaagccgacgacgctgcaaagcaagatg
cggaagctcgggatccggaaggacggagagaagggctga
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