Sorangium cellulosum So ce56: sce5556
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Entry
sce5556 CDS
T00634
Name
(GenBank) unnamed protein product; Conserved hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl00300
Lysine biosynthesis
scl00470
D-Amino acid metabolism
scl01100
Metabolic pathways
scl01110
Biosynthesis of secondary metabolites
scl01120
Microbial metabolism in diverse environments
scl01230
Biosynthesis of amino acids
Module
scl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
sce5556
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
sce5556
Enzymes [BR:
scl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
sce5556
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CAN95719
UniProt:
A9G338
LinkDB
All DBs
Position
7823516..7824823
Genome browser
AA seq
435 aa
AA seq
DB search
MQEAEITIGGISVRDLAEQYGTPLYAYDAERIRENFRRLTRALRGNYPEVSVFYAIKACN
NLEIAKLLVDEGSGVDAASPNEIRLAQALGLSGERIIYTGNSLSDEDLAAGLRAGVNFNV
DDHGILKRLFSIGKPRCMSFRINPSGEDIATPDLKPFAGPSAKFGIHPRHVEEAYRTALE
NGVERLGVHMMPHSQAHKPENFAHVTGKLLDLIGPVARKLGFDLAFVDIGGGLGIPYRRE
QPPLDVEAVARGIAAMVRKKCAEHGLKEPRLVMEPGRYFVGDAGYVLGRVISIKQGYKTI
IGTDISMNTMARPVMYGAYHEVRINGRGGQTAPMAMTGQVCENTDMWIPEREFPADVAEG
DVVVLMDAGAYGHVMSYDYNGRLRPAEVLIDGGKSRLIRRRDTFEDMVSRMCLSDDIKER
LRAASGEPAGATGCG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggcagagatcacgatcgggggcatttcggtccgcgacctcgcggagcaatac
ggaacaccgctctatgcctacgatgccgagcgcatccgggagaacttccgtcgactcacg
cgggcgctgcgcggcaactacccggaggtgtccgtcttctatgccatcaaggcgtgcaac
aacctggagatagcgaagctcctggtcgacgagggctcgggcgtggacgccgcgagcccg
aacgagatccgcctggcgcaggcgctcgggctgtcgggcgagcggatcatctacacgggc
aacagcctctcggacgaggacctggccgcggggctgcgcgccggggtgaacttcaacgtg
gatgatcacggcatcctgaagcgcctgttctcgatcgggaagccgcgctgtatgtcgttc
cggatcaacccgagcggcgaggacatcgcgacccccgatctgaagccgttcgcgggcccg
tccgcgaagttcgggatccacccgcgccacgtggaggaggcctatcgcaccgcgctcgag
aacggggtcgagcggctcggggtgcacatgatgcctcactcgcaggcgcacaagccggag
aacttcgcgcacgtcacgggcaagctgctcgacctgatcggcccggtggcccggaagctc
ggcttcgacctcgccttcgtggacatcggcggcgggctcggcatcccctaccggcgggag
cagccgccgctcgacgtggaggccgtcgcccgcgggatcgccgcgatggtgcggaagaag
tgcgcggagcacggcctgaaggagccgcgcctcgtcatggagccggggcgctacttcgtc
ggggacgcgggctacgtgctcgggcgggtgatctcgatcaagcagggatacaagacgatc
atcggcacggacatctcgatgaacacgatggcgcgcccggtgatgtacggcgcttaccac
gaggtccggatcaacggccgcggcggccagacggccccgatggcgatgacgggccaggtc
tgtgagaacacggatatgtggatcccggagcgcgagttccccgcggacgtcgccgagggg
gacgtggtcgtcctgatggacgcgggcgcgtatggccacgtgatgagctacgactacaat
ggccggctgcggccggccgaggtgctcatcgacggcgggaagagccggctgatccggcgg
cgcgacacgttcgaggacatggtctcgcggatgtgcctgtccgacgacatcaaggagcgc
ctgcgcgcggcgtcgggagagccggccggcgcgaccggctgcggctga
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