Sorangium cellulosum So ce56: sce5962
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Entry
sce5962 CDS
T00634
Symbol
pcnA
Name
(GenBank) putative polynucleotide polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sce5962 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scl03019
]
sce5962 (pcnA)
Enzymes [BR:
scl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
sce5962 (pcnA)
Messenger RNA biogenesis [BR:
scl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
sce5962 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
CAN96126
UniProt:
A9GC22
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All DBs
Position
8369378..8370388
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AA seq
336 aa
AA seq
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MGDPVTSKVWKASVQEIVTQEASPKRAMEALEWAVQRAEKAEVEQPEAGAEPRASSRVIS
GRPADFKAAAAAYLPDVRKLLDRVMMSDDAEAGLDALLESGALAAMLPEVEAMVGFGDGE
WRHKDVWKHTKQVVRQAVPRLEVRWAALLHDIGKTRTRSISPTGEVHFFGHAEVGARMFD
KIDRRLPLFTKEEALKNSIRFLILHHLRASQYDASWTDSAVRRFAKEMGGCLKDVLDLSR
ADITTKRPEKKRKGLKQISELAERVLQVQAEDAVVPPLPSGIGDAIMHAFGLPPSRRIGE
IKRALEEAVEAGEVASHQEADVYIAFLREHAGRFGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaccccgtaacctcgaaagtgtggaaggccagcgtgcaggagattgtcacccag
gaagcgagcccgaagcgggcgatggaggccctcgagtgggccgtccagcgagcagagaag
gcggaggtcgagcagcccgaggcgggcgccgagccacgcgcctcgtccagggtgatctcc
gggcggcccgccgacttcaaggccgcggccgccgcctacctgcccgatgtccgcaagctg
ctcgaccgggtcatgatgagcgacgacgccgaggccgggctcgacgccctgctcgagtcg
ggcgccctcgccgcgatgctgcccgaggtcgaggcgatggtgggcttcggcgacggggag
tggcgccacaaggacgtctggaagcacacgaagcaggtggtgcgccaggccgtcccgagg
ctcgaggtccgctgggcggccctgctccacgacatcggcaagacgaggacgcgctccatc
tcgccgacgggcgaggtccacttcttcggtcacgccgaggtcggcgcgcggatgttcgac
aagatcgaccggcggctgccgctcttcacgaaggaggaggcgctgaagaacagcatccgc
ttcctgatcctgcaccacctccgggcgagccagtacgacgcgtcgtggaccgacagcgcg
gtgcgccggttcgccaaggagatgggcggctgcctgaaggacgtgctcgacctgtcgcgg
gcggacatcacaacgaagcggcccgagaagaagcggaaggggctgaagcagatcagcgag
ctcgccgagcgggtgctccaggtccaggcggaggacgcggtggtgccgccgctgccgagc
ggcatcggcgacgccatcatgcatgcgttcgggctgccgccgtcgcggcggatcggcgag
atcaagcgcgcgctggaggaggcggtcgaggcgggcgaggtggcgtcgcaccaggaggcg
gacgtctacatcgcgttcctccgggagcacgcggggcgtttcgggatctga
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