Sorangium cellulosum So ce56: sce6027
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Entry
sce6027 CDS
T00634
Name
(GenBank) putative OmpA family outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scl02000
]
sce6027
Transporters [BR:
scl02000
]
Other transporters
Pores ion channels [TC:
1
]
sce6027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Phenol_MetA_deg
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
CAN96191
UniProt:
A9GCH8
LinkDB
All DBs
Position
complement(8449908..8451374)
Genome browser
AA seq
488 aa
AA seq
DB search
MRAPILAAITCAACAVLASATPASAQSTDIDVERFKPAVTHDAFVVTEGSGVREPGDPWA
FGLFLNYARNPLIVATGDGEVRSQIVSGRLGADLMASVTIAEPFALGLDIPFFLAQSGEG
SPSFAGLGDIRLVPKLRLLDDRDSIGLGLVAELRVPTHTGDFAGGARNVVFWPRIVLDHR
FAPGLRFGVNAGVAIREGTTYANVEAASELTYAAALGYRFGGIDGKVEIGAEANGGIGIA
ADDLNEEETPLEALGYVKINPSEEWEITAGPGIGALAGYGVPIFRVFAGVKYTPTSHDRD
HDGVDDERDQCPDVPEDRDADYDSDGCPEEDADDDHDGVPNADDECPDEKETINGVEDDD
GCPDKGEPRVAYEQGEFVIRDTIRFRTGSAELEQDSYRTLDQVALVMKANPEIERLRVEG
HTDETGTPELNQELSEQRAETVRKYLIRKGVSPGRLTAEGFGSDRPVAEGTDPASLAKNR
RVEFVIDE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaccgatcctcgccgccatcacctgcgccgcgtgcgcggtcctcgcctccgcg
acgcccgcgtcggcgcagagcacggacatcgacgtcgagcgcttcaagccggccgtcacc
cacgacgccttcgtcgtcacggagggctccggcgtccgcgagcccggcgatccatgggcg
ttcgggctgttcctgaactacgcgcgcaacccgctgatcgtcgcgacgggcgacggcgag
gtgcgcagccagatcgtgagcggccgtctgggcgccgatctcatggcgtcggtcacgatc
gccgagccgttcgcgctcggcctcgacatcccgttcttcctcgcgcagtcgggcgagggc
tctccgtcgttcgcgggcctcggcgacatccggctcgtgccgaagctgcgcctgctcgac
gaccgcgactccatcggcctcggcctcgtggccgagctgcgcgtcccgacgcacaccggg
gatttcgcgggcggcgcgcgcaacgtcgtgttctggccgcgcatcgtgctcgatcaccgg
ttcgcgcccggcctcaggttcggcgtcaacgcgggcgtcgcgatccgcgaggggacgacg
tacgcgaacgtcgaggcggcgagcgagctgacgtacgccgcggcgctcggctaccgcttc
ggcggcatcgacgggaaggtcgagatcggcgccgaggcgaacggcggcatcggcatcgcc
gcggacgacctgaacgaggaggagacgccgctcgaggcgctcggctacgtgaagatcaac
ccgagcgaggagtgggagatcaccgcgggcccggggatcggcgcgctggccggctacggc
gtgccgatcttccgcgtgttcgcgggcgtgaagtacacgccgacctcgcacgacagggac
cacgacggcgtcgacgacgagcgcgaccagtgccccgacgtcccggaggatcgcgacgcc
gactacgacagcgacggctgccccgaggaggacgccgacgacgatcacgacggcgtgccg
aacgcggacgacgagtgcccggacgagaaggagacgatcaacggcgtcgaggacgacgac
ggctgccccgacaagggcgagccgcgggtcgcgtacgagcagggcgagtttgtgatccgg
gacaccattcgcttccggaccggctcggccgagctcgagcaggactcgtacaggaccctg
gatcaggtggcgctcgtcatgaaggcgaaccccgagatcgagcggctgcgggtggagggg
cacaccgacgagaccggcacgcccgagctgaaccaggagctgagcgagcagcgcgccgag
acggtccggaagtacctgatccggaagggcgtcagcccgggccggctcacggccgagggc
ttcgggtcggacaggccggtggccgagggcaccgatccggcgagcctggcgaagaaccgc
cgcgtggagttcgtgatcgacgagtga
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