Sorangium cellulosum So ce56: sce6396
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Entry
sce6396 CDS
T00634
Name
(GenBank) hypothetical protein predicted by Glimmer/Critica
KO
K21449
trimeric autotransporter adhesin
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scl02000
]
sce6396
Transporters [BR:
scl02000
]
Other transporters
Pores ion channels [TC:
1
]
sce6396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_2
CBM96
Disaggr_repeat
TSP_3
TGFb_propeptide
Motif
Other DBs
NCBI-ProteinID:
CAN96563
UniProt:
A9GKC2
LinkDB
All DBs
Position
8924520..8928170
Genome browser
AA seq
1216 aa
AA seq
DB search
MRDRMGRMGQVMAAAAMVGGCASTEAPRDPAPSMDGAAAAPAAPDTALGPARLRAAYIAA
VQASAPEGYRVIEASPGGNEASLRAPNPAHRLAADFSASGVRIAPEGEARWSFSMAAARY
GCAGDLREAPRAAPSATKNRVELRRQGTSPGEGLVEWYVNGPLGLEQGFTVPGAPPCLAP
GDQDLVIELALGGDLRATPLAGGEGVALREASGAVAMRYTDLHATDAAGRTLPAWMELGV
DERTLSLRVDTAGAAYPVTVDPLAASERAALIAVDGSTPIHLNGDAIAMSGDTAIVGAPG
SAAYVFVKSGGAWTQQARLVPGDGAAGDGFGASVAISADTAVVGAPWGTGGAGAAYVFVR
SGGVWSEQAKLVASGGSSNPAGGAVAVDGDRAVLSAETSAYVFSRSGGAWSEEVELVAPA
GANAWSAPPVAIEGGTVVVGSPGDSSWWEGDGEGAAYVFDASDWGGAHRLAADPPQAFDR
FGSSVAISGGRILVGAPGVLSPPMPWYELGRGLAYVFDRGASGWRQDSRLIATDGRTGDG
LGSAVALSGSMAVAGAILADRVDQPDAGAAYVFSPAGGEWIEIEKGRLTGDGPTDGAFGK
AVAVSGSSVIAGSPAYAFELAQDSDGDGVVDDDDNCPAAANPSQVDADADGHGDACDPRC
VTFRRGLGGDVADATLWQVSPTWNDGASTTLSTGTGTGGVRRSLLRFDLAGVPASAEITS
ATLSLYQTYKIESSTVRVHRATAAWTESGVTWGNFGGGGHFDPAIEASFVTGGPSGTTGF
RNVDVTALAQAWVSGELANHGVLIEEAAVTRSTLRSSESASAAERPALTVCYHDTCEDGI
QNGAESGVDCGGPSCAPCAPGSVLWSKRFVNGWHESMRARAVAVDSADSVIFGGYAYGTI
DFVGQGDPTLMEMFNTKFLAKLDAAGNHVWDERPLGGSTFLSLAASDTGELIAGSNSGLQ
RFTAAGDLLAEAAGLGQVKVASAGAGAALAGVVWDTVDLGTGPLAGGPGSDLLVAKLDAA
GAPIWIRTFASDPYDSDPASVTVDGAGNVIVLGRFSGALDLGGGPLASSPTAHGMYLAKF
DAAGNHVFSQVVSGTPDDADVAATPSGELIVALGTTVTKLTASGAPLWSVDTTGLGLLSN
TWGIPAVALDGAGNVFINPPGAIAKLSPSGAVLWSVDPIGSAERGDIFDLAVDSAGNVIG
VGTYDRGDAIVVKLAP
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcgagatcgaatggggaggatgggacaggtgatggccgcagccgccatggtggggggc
tgcgcctccaccgaggcgccgcgagaccccgcgccgtcgatggacggcgcggcggcggcg
cccgcggcgcccgacacggcgctgggccccgcgcgcctgcgggcggcgtacatcgcggcc
gtgcaggcgtcggcgcccgagggctaccgggtgatcgaggcgtcaccgggcgggaacgag
gcgagcctgcgcgcgccgaacccggcgcaccggctcgcggccgatttcagcgcgtcgggc
gtgcggatcgccccggaaggcgaggcgcggtggagcttctcgatggccgccgcccggtac
ggctgcgcgggcgatctgcgcgaggcgccgcgcgcggccccgagcgccacgaagaaccgc
gtggagctccgccggcagggcacatcgccgggcgaggggctcgtggagtggtacgtgaac
gggccgctcgggctggagcagggcttcacggtgcccggggcgccgccctgcctcgccccc
ggggaccaggacctcgtcatcgagctcgccctgggcggcgatctccgcgcgacgccgctc
gccggcggcgagggggtcgcgctgcgcgaggcgtccggcgcggtggcgatgcggtacacg
gatctccacgccaccgacgccgcggggcggacgcttcccgcgtggatggagctcggcgtc
gacgagcgcacgctgtcgctgcgcgtggacaccgccggggccgcgtacccggtgacggtg
gatccgctcgccgcctcggagcgggcggcgctcatcgcggtcgacggctcgaccccgatc
cacctgaacggcgacgcgatcgccatgtcgggcgacaccgcgatcgtcggggcgcccggg
agcgcggcgtacgtgttcgtgaagagcggcggcgcctggacgcaacaagccaggctcgtc
ccgggcgacggggccgcgggcgacggcttcggcgcctcggtcgcgatctcggcggacacg
gccgtggtcggggcgccctgggggaccgggggcgcgggcgccgcctacgtgttcgtgcgg
agcgggggcgtgtggtccgagcaggccaagctcgtcgcgagcggcgggtcgtcgaacccc
gcgggcggggcggtcgcggtcgacggcgaccgggccgtcctctccgccgagacgtcggcc
tacgtgttctcccgcagcggcggcgcctggagcgaggaggtcgagctcgtcgccccagcc
ggcgccaacgcctggagcgcgccgcccgtcgcgatcgagggcggcacggtggtcgtgggc
tcgccgggggactcgtcgtggtgggaaggcgacggcgagggcgccgcctacgtgttcgac
gcgagcgactggggcggcgcgcaccggctcgccgcggacccgccccaggcattcgaccgc
ttcgggagctcggtcgcgatctcgggcgggcgcatcctcgtgggcgcgccgggcgtcctc
agcccgccgatgccgtggtacgagctcgggcgcggcctggcctacgtgttcgaccgcggg
gcgagcggctggcgccaggactcccggctgatcgcgaccgacggcaggacgggggacggc
ctgggaagcgccgtggcgctctccggcagcatggcggtcgccggcgcgatcctggccgac
cgcgtcgatcagccggacgcgggcgcggcgtacgtgttctcgccggcgggcggcgagtgg
atcgagatcgagaagggcaggctcaccggcgacggcccgaccgacggcgccttcggcaag
gccgtcgccgtgtcggggagctcggtcatcgcgggctctcccgcgtacgcgttcgagctc
gcgcaggacagcgacggcgacggggtggtcgacgacgacgacaactgccctgccgccgcg
aacccgtcgcaggtggacgccgacgccgacgggcacggcgacgcgtgcgacccgcggtgc
gtgaccttccggcgcggcctcggcggggacgtggccgacgcgacgctctggcaggtgtcg
cccacgtggaacgacggcgcgagcaccacgctctcgacgggcaccggcacgggcggcgtc
cggcggagcctcctccggttcgacctcgccggcgtcccggcgagcgcggagatcacctcg
gcgacgctgtcgctgtaccagacgtacaagatcgagagcagcacagtgcgcgtccaccgg
gccaccgccgcgtggacggagtcgggcgtcacgtggggcaacttcggcggcggcggccat
ttcgatccggcgatcgaggcctccttcgtcaccggcggtccttccggcaccaccggcttc
cggaacgtcgacgtgaccgcgctcgcgcaggcctgggtgagcggcgagctcgccaaccac
ggcgtgctgatcgaggaggccgcggtgacccggagcaccctgcggagcagcgagagcgcg
agcgccgcggagcggcccgcgctcacggtctgctatcacgacacctgcgaggacggcatc
cagaacggcgccgagtccggcgtggactgcgggggcccgagctgcgccccgtgcgccccc
ggcagcgtcctctggagcaagcgcttcgtcaacggctggcacgagtcgatgcgcgcgcgc
gccgtcgcggtcgacagcgcggacagcgtgatcttcggcggctacgcctatggcacgatc
gacttcgtcgggcagggcgacccgacgctcatggagatgttcaacaccaagttcctcgcc
aagctcgacgccgcggggaaccacgtgtgggacgagcgcccgctcggcggcagcaccttc
ctgagcctcgccgcgtcggacaccggcgagctgatcgcgggctcgaactccggcctgcag
cggttcaccgcggcgggcgatctcctcgcggaggccgctggcctcggccaggtcaaggtc
gccagcgccggcgcgggcgccgcgctcgccggcgtcgtgtgggacacggtcgatctcggc
accggccccctcgccggcgggccgggcagcgatctcctggtcgcgaagctcgacgcggcg
ggcgcgccgatctggatcaggaccttcgcgagcgacccgtacgacagcgaccctgcgagc
gtcaccgtggacggcgcgggcaatgtcatcgtcctcggccgcttctccggcgcgctcgac
ctcggcggcggaccgctggcgagctcgccgacggctcacggcatgtacctggcgaagttc
gacgcggcagggaatcacgtcttcagtcaggtcgtctccggcacgccggatgacgcggac
gtcgccgcgaccccgtccggggagctgatcgtcgccctgggcacgaccgtgaccaagctc
accgcctcgggcgcgcccctgtggagcgtcgatacgacgggcctcggcctgctctccaac
acctggggcatccctgccgtcgccctcgacggcgccggcaacgtgttcatcaacccgccc
ggcgcgatcgcgaagctctcgccgtcgggcgccgtgttgtggtcggtcgacccgatcggc
agcgcggaacgcggcgatatcttcgatctggccgtggacagcgccggcaacgtgatcggc
gtgggcacgtacgaccgcggggacgcgatcgtcgtcaagctcgccccgtag
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