Sorangium cellulosum So ce56: sce6412
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Entry
sce6412 CDS
T00634
Symbol
phr
Name
(GenBank) High confidence in function and specificity
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce6412 (phr)
Enzymes [BR:
scl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
sce6412 (phr)
DNA repair and recombination proteins [BR:
scl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
sce6412 (phr)
Prokaryotic type
sce6412 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
CAN96579
UniProt:
A9GKF8
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All DBs
Position
8947531..8949057
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AA seq
508 aa
AA seq
DB search
MISSSVPELRLRTRNAMPVREGGDYVLYWMIASRRTRYNFGLERAIAWSMALDRPLVVLE
ALRCGYRWASDRIHRFVIDGMADNARRLAAAGVAHHPYVEPAEGAGKGLLGALAARACVV
VTDDYPCFFLPRMVASAARQAPVRLEQVDSNGLLPMRAADRVFTTARSFRIFWQRVIGEH
LGAQPAVDPLKRAKLRPAAPLPRAIARRWPAASPALLGGDPAALSALPIDHTVPPAPCRG
GPEAAGKALARFVADRLPRYLEERDHPDAGATSGLSPYLHFGHLAAHEVFAAVARREAFR
VERLGRPGDGVKRPSGSREGFWGMSASAEAFLEQLVTWRELGFNAFALGASEGDGPRPSW
KRDPTEYESLPDWALATLEKHARDRRPRVYPIEALAAGATYDRIWNASQVELLREGRMHN
YLRMLWGKKILEWSRTPREALEIMIELNDRYALDGRDPNSTSGIFWVLGRYDRAWGPERE
IFGTIRYMSSENTARKLHLKEYLARYTP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgatctccagcagcgtccccgagctccgtctccgcacccgcaacgcgatgcctgtccgc
gagggcggcgactacgtcctttactggatgatcgcgagccgccggacacggtacaatttc
ggtctggagcgcgcgatcgcctggtcgatggcgctcgatcgaccgctcgtcgtgctggag
gcgctccggtgcggctaccgctgggcgagcgacaggatccatcgcttcgtgatcgacggc
atggccgacaacgcgcgccgcctcgcggcggccggcgtcgcgcatcatccctacgtcgag
cccgccgagggggctggcaagggcctgctcggcgcgctcgcggcgcgggcgtgcgtggtg
gtcacggacgactacccctgctttttcctcccgcgcatggtcgcctcggcggcgcggcag
gcgccggtccgcctcgagcaggtggactcgaacggcctcttgccgatgcgcgcggccgat
cgggtgttcacgaccgcgcgctcgttccgcatcttctggcagcgggtgatcggcgagcac
ctcggcgcgcagccggccgtcgatccgctgaagcgggcgaagctccggcctgcggcgccc
ctcccccgcgcgatcgcgcgcaggtggccggcggcctcgccggcgctgctcgggggcgac
cctgcggcgctctccgcgctccccatcgatcacaccgtcccgccggcgccctgccggggc
ggcccggaggcggctggcaaggcgctcgcgcgcttcgtcgcggaccggctgccgcgctac
ctggaagagcgcgatcaccccgacgccggcgcgacgagcggcctgtcgccgtacctgcac
ttcggccacctcgcggcgcacgaggtcttcgcggccgtcgcccggcgcgaggccttccgc
gtcgagcggctcggccgccccggggacggcgtgaagcggccgagcggcagccgcgagggg
ttctgggggatgagcgcgtcggccgaggcgttcctcgagcagctcgtcacctggcgggag
ctcgggttcaacgccttcgcgctcggggcgagcgagggagacgggccgcgcccctcgtgg
aagcgcgatccgaccgagtacgagtctctgccggactgggcgctcgcgacgctcgagaag
cacgcgcgcgacaggcgcccgcgcgtctacccgatcgaggcgctcgcggccggggcgacc
tacgaccggatctggaacgcgtcgcaggtcgagctcctccgcgaggggcgaatgcacaat
tacctccggatgctctggggcaagaagatcctggagtggtcgcggacgccgcgcgaggcg
ctcgagatcatgatcgagctcaacgaccggtatgcgctcgacggccgcgacccgaactcg
acctcgggcatcttctgggtgctcggccgctacgatcgggcctggggtccagagcgggag
atcttcggcacgatacgttacatgtcgtccgagaacacggcccggaagctgcacctcaag
gagtacctggcgcgctatacgccgtag
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