KEGG   Sorangium cellulosum So ce56: sce6642
Entry
sce6642           CDS       T00634                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:scl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    sce6642
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:scl02022]
    sce6642
Two-component system [BR:scl02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   sce6642
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 FHA HTH_8 Yop-YscD_cpl AAA_5 Mg_chelatase AAA_16 AAA_2 AAA MCM HTH_23 HTH_50 nSTAND3 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: CAN96811
UniProt: A9GPV5
LinkDB
Position
9238858..9240528
AA seq 556 aa
MDEGFPGSDVRGSCATTLRLAIVAGSTITFAPLPPHGRVVLGRDEGCDVRIDDRSVSRRH
AALHVGPPLRIEDLGSANGTFVGEPQARALTARTHRLRRLSRESAEVGVGERFNLGATTV
VVGRAPGGAAEEPDRGKPPADIVLLAPAMLALYEQAARAARSPISVLILGETGVGKEVLA
RTLHARSPRSSGPYVELNCAALPPSLLEGELFGHEKSAFTGASHARPGLLEAAHGGTLFL
DEIGELPLAFQAKLLRVLEDRKVLRIGGRTPRRLDLRFVAATNRDLEAEIARGAFRQDLY
FRLNGISLVVPPLRERVAEIGPLAGRFLEEACLQLDQRGAPRISPEALAALEAYAWPGNV
RELRNVIERAAVLCAGESVLPADLPPHLMNGATPPSSGAASRPSGTIPPPPPLPPSGAAL
PPSGAALPPSGAALPPAGAAPLSSGDAPPSGRAAPPSSRATPLSSGDAPPSGRAALPPPP
PSGAGLPPADAPPPSGDALARLRLEMKAADRQRVVEALERSAGNQTRAAKLLGVSLRTLI
NRIDEYGIPRPRKRSP
NT seq 1671 nt   +upstreamnt  +downstreamnt
gtggacgaaggctttcccggcagcgatgtgcggggctcctgcgcgacgacgctccggctc
gcgatcgtggccggcagcacgatcaccttcgccccgctgccgccccacggccgcgtcgtc
ctcgggcgcgacgaggggtgcgacgtgcggatcgacgatcgctcggtgtcgcgccggcac
gcggccctccacgtcggcccgccgctccggatcgaggacctcgggagcgccaacggcacc
ttcgtcggcgagccgcaggcccgcgcgctgacggcgcgcacgcaccgcctgcggcgcctc
tcgcgggagagcgccgaggtcggcgtcggcgagcgcttcaacctcggcgcgaccaccgtc
gtcgtcggccgcgcgcccggcggggcggccgaggagcccgaccgcggaaagccgcccgcg
gacatcgtgctgctggccccggcgatgctggcgctctacgagcaggccgcccgcgccgcg
cggagccccatcagcgtgctcatcctgggcgagacgggggtgggcaaggaggtgctcgcc
cggaccctccacgcgcgctctccgcggtcgagcgggccttacgtcgagctgaactgcgcc
gcgctgccgccgtcgctcctcgagggcgagctcttcggccacgagaagagcgccttcacg
ggcgccagccacgcgcgccccggcctgctcgaggcggcccacgggggcacgctgttcctc
gacgagatcggcgagctgcccctcgcgttccaggcgaagctgctccgcgtcctcgaggac
cggaaggtgctccgcatcgggggccgcaccccccgccggctcgatctccgcttcgtggcg
gcgaccaaccgcgatctcgaggcggagatcgcgcgcggcgccttccgccaggacctctac
ttccggctgaacggcatctccctcgtcgtcccgccgctccgcgagcgggtcgccgagatc
ggcccgctcgccggcaggttcctcgaggaggcgtgcctgcagctcgaccagcgcggcgcg
ccgcgcatctcgccggaggcgctcgccgccctcgaggcatacgcctggccggggaacgtg
cgcgagctgcgcaacgtgatcgagcgcgcggcggtcctgtgcgcgggggagtcggtcctg
cccgccgatctgccgccgcacctgatgaacggcgccacgcccccgtcgagcggcgccgcg
tcgcggccgagcggcaccatccccccgccgccgccattgccgccgagcggcgccgcgctg
ccgcccagcggcgccgcgctgccgccgagcggcgccgcgctgccgcccgccggcgccgcg
cccttgtcgagcggcgacgcccccccgtcgggccgcgccgcgcccccgtcgagccgcgcc
acgcccctgtcgagcggcgacgcacccccgtcgggccgcgccgcgctgccgccgcctccg
cccagcggcgccgggctgccgccggccgacgcaccgccgccgagcggcgacgccctggcg
aggctccggctcgagatgaaggccgcggaccgacagcgcgtcgtcgaggccctcgagcgg
tccgcgggcaaccagacgcgcgccgccaagctcctcggcgtctcgctgcgcacgctgatc
aaccgaatcgacgagtacggcatcccgcggccgcggaagcggtcgccctga

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