Sorangium cellulosum So ce56: sce7155
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Entry
sce7155 CDS
T00634
Symbol
rtcR
Name
(GenBank) Sigma-54 dependent transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
scl
Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scl03000
]
sce7155 (rtcR)
Transcription factors [BR:
scl03000
]
Prokaryotic type
Other transcription factors
Others
sce7155 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_16
NACHT
AAA_22
MCM
AAA_2
AAA_19
AAA_14
AAA_30
AAA_7
ATPase_2
ABC_tran
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
CAN97324
UniProt:
A9ERT0
LinkDB
All DBs
Position
complement(9976539..9978233)
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AA seq
564 aa
AA seq
DB search
MRIRPVYKSVREHSMTRKTTVVLGMLGPTLDTGKTAERWSRWRPSVALCQHEDLIVDRFE
LLYQRRFEGLAETVMGDVRRASPETDIRGHVVEVDDPWDFEAVYGALHDFARAYPFAPDR
EDYLVHITTGTHVAQICLFLLTESRYFPGRLIQTSPPKRDREELAAGSFTIIDLDLSKYD
RIASRFQKEQREGVSFLKSGIDTRNAAYNRLIERIEHVAIASRAPILLMGPTGAGKSQLA
RKIYDLKKGRRQVGGDFVDLNCATIRGDGAMSALFGHTKGSFTGALQDRPGLLRKAHEGV
LFLDEIGELGADEQAMLLRAIEEKAFLPVGSDREVRSEFQLLAGTNRDLALEVLAGRFRE
DLLARINLWTFRLPGLRERVEDIEPNLDYELDASARLLGVRITMSRDARARFLEFATSRE
AVWPGNFRDFNAAVTRMATLAPGGRIGVPIVEEEIERLVEAWRRAPAAGGRTFAGGGAAG
EGSDGDDLVVAALGARRAAALDPFDRVQLAEVLRVLKGARSLSEAGRVLFAASRAKKKSV
NDADRLRKYLARFDIDWSEVAGAG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgcggattagacctgtgtataaatcggttagagaacattctatgacgcgcaagacgacc
gtggtcctcggcatgctgggcccgacgctggacaccgggaagacggcggagcgctggtcg
cgctggcgcccgagcgtggcgctgtgccagcacgaggacctgatcgtcgaccggttcgag
ctgctctaccagcgccgcttcgagggcctggccgagacggtgatgggcgacgtgcggcgc
gcctcgccggagacggacatccgcggtcacgtggtcgaggtggacgatccgtgggacttc
gaggcggtgtacggcgcgctccacgacttcgcgcgggcgtacccgttcgcgccggaccgg
gaggactacctcgtccacatcacgacgggcacgcacgtcgcgcagatctgcctgttcttg
ctcacggagtcgcggtacttcccgggtcgcctcatccagacgtcgccgccgaagcgcgac
cgtgaggagctcgcggccgggtcgttcacgatcatcgatctcgacctctcgaagtacgac
cgcatcgcgtcgcgcttccagaaggagcagcgcgagggggtgtcgttcctgaagagcggc
atcgacacgcggaacgcggcgtacaaccggctgatcgagcggatcgagcacgtggcgatc
gcgtcgcgcgcgcccatcctgctgatgggcccgacgggggcgggcaaatcgcagctcgcg
cggaagatctacgacctcaagaaggggcgccggcaggtgggcggcgacttcgtggatctg
aactgcgcgacgatccgcggcgacggggcgatgtcggcgctgttcgggcacacgaagggg
tcgttcacgggggcgctccaggaccgcccggggctcctgcgcaaggcgcacgagggggtg
ctgttcctcgacgagatcggcgagctcggcgcggacgagcaggcgatgctgctgcgggcg
atcgaggagaaggcgttcttgccggtcggctcggacagggaggtgaggagcgagttccag
ctgctcgccggcacgaaccgggatctcgcgctggaggttctggcggggcgcttccgggag
gatctcctggcgaggatcaacctgtggaccttccggctcccgggtctcagggagcgggtc
gaggacatcgagccgaacctcgattacgagctcgacgcctcggcgcggctgctcggcgtg
cggatcacgatgagccgcgacgcgcgcgcgcggttcctcgagttcgcgacgtcgcgagag
gcggtgtggccgggcaacttccgggacttcaacgcggccgtgacgcggatggcgacgctc
gcgcccggggggaggatcggggtgccgatcgtggaggaggagatcgagcggctggtggag
gcctggcggcgagcgccggcggcgggcgggcgaacgttcgccgggggcggcgcggcgggg
gaggggagcgacggggacgatctcgtggtcgcggcgctcggcgcgcgccgggcggcggcg
ctcgacccgttcgaccgggtgcagctggccgaggtgctgcgggtgctgaaaggcgcgcgg
tcgctgtcggaggcgggacgggtgctgtttgcggcgtcgcgggcgaagaagaagagcgtc
aacgacgcggaccggctgcggaagtacctggcgcggttcgacatcgactggagcgaggtg
gcgggggccggttag
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