KEGG   Sorangium cellulosum So ce56: sce7244
Entry
sce7244           CDS       T00634                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scl00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    sce7244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scl03021]
    sce7244
Transcription machinery [BR:scl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     sce7244
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2
Other DBs
NCBI-ProteinID: CAN97413
UniProt: A9ESS1
LinkDB
Position
complement(10111333..10113480)
AA seq 715 aa
MLLRPRKRTQPCSSARSQRNVSLDRTWIAPSALHSAPRPSSQTGEAGTHAKKGTVFASGA
GLLPGTGAGASFCKSRPASGEKSSTGIKRKHQRLPVSTGAPSVSSSPLFGTKSSRLPSKG
GETFQSRKVSRLEVNADTKTKMSTSTARRPETARRNAKSSAVGASARLAASKSSQGAETA
SAPRRGASQTTELEVSEVEDFGDNQSPRSHFQGATTVEGAAMRSTKSNATVVKGDPLAQG
GTATPEIAALGLLEDDQTEETVVRPRPAEILDEERTADFIDLDLGPLDRLPQPERARNQD
RELKDVEDGGGDSMLARYFRDMALHPVMGPDEELDTARAVERTEVEHWVALLSYLPAAEY
ILTALEEDVAKAGEDEVKAPQIAEMQKLVRLAKKQKGKLLAEQEKPWTQLSEELAAAVRL
PDSDRLWMARAFGIARDLVREPDFEDDVSDPEETRPTRPRLPMSGSYRRYLDRVERSFQA
QHDAKNRFVKANLRLVVSIARRYNRGRLPLIDLIQEGNIGLMKAVERFDHSRGYRFSTYA
SWWIRHAISRALADKGRAVRIPVHMLDTYNRVARATQAIIARTGHEPTIEELEKETGVPR
EKLDKVKDFYAETPFSLDRPVGDEDGRKFIDFLQEENALSPFDHLANRKWSDEVRRLLTT
LTPIESRIIRWRFGLDDEDELTLKEIGDKYNLSRERIRQLQEQALGKIRKQMRDY
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgttgttgcgtccccgaaagcgtacccagccatgcagctcggctcggtcgcagcgaaac
gtctcgctcgacaggacatggatagcgccttccgctctacatagcgcaccccggccgagc
tctcaaacaggagaagcgggaacgcacgctaaaaaaggcactgtttttgcttctggagct
gggctgctaccggggactggcgcaggagcatcgttctgcaagagcagacctgcctcaggt
gagaagagttcgaccggaatcaaaagaaagcaccagcggttgccagtttcaacaggggct
ccttcggtcagctcctcccctctgtttggcacgaaatcgtctcgcctgccgtcaaaaggt
ggcgagacatttcaatctcgcaaggtcagccgtttagaagtgaacgccgacacaaagacc
aagatgagcacgtcgaccgcccgccgtccagaaactgcgcggagaaacgccaagtcctct
gctgtaggtgcctctgcgcggctcgcggcatccaagagctcgcagggggccgagaccgca
tcggctccccggcggggggcatcgcagaccaccgagttggaggtctccgaggtcgaagat
ttcggggacaaccagtcgccgcgctcgcactttcaaggagctaccaccgtggagggagcc
gccatgaggtcgaccaagagcaacgccactgtagtgaagggcgacccgctcgctcagggt
gggacggccacgccggaaatcgcagcgctcggccttctggaagacgaccagacggaggag
acggttgtgcgaccccgcccggccgagatcctcgatgaggagcggacggccgacttcatc
gatttggacctcgggccgctcgatcggctgcctcagcccgagcgcgcgaggaaccaggat
cgggagctgaaggatgtcgaggacgggggcggtgactcgatgctcgcccgctatttccgc
gacatggcgctccaccccgtcatggggccggacgaggagctcgacaccgcgcgggcggtc
gagcgcacggaggtggagcactgggtggctctgctctcctacctgcctgcggccgagtac
atcctcaccgcgctcgaggaggatgtcgccaaggcgggtgaggacgaggtgaaggctccg
cagatcgcggagatgcagaagctcgttcgcctggcgaagaagcagaagggaaagctgctc
gccgagcaggagaagccgtggacccagctctccgaggagctcgctgcggctgtccgcctg
cctgactcggatcgcctctggatggcgcgtgccttcggcatcgcgcgcgatctcgtgcgc
gagcccgacttcgaggacgacgtgagcgatcccgaggagacccgccccacgcggccgagg
ctcccgatgtctggctcctaccgccgttacctcgatcgggtcgagcgatccttccaggcg
cagcacgacgcgaagaaccgcttcgtgaaggccaacctgcggctcgtcgtgtcgatcgcg
cggcgctacaaccgcgggcgcctgccgctcatcgatctgatccaggaaggcaacatcggc
ctgatgaaggcggtggagcgcttcgaccacagccgtggctaccgcttctcgacgtacgca
tcgtggtggatcaggcatgcgatcagccgcgccttggccgacaagggccgcgctgtccgc
atcccggtccacatgctcgatacgtacaaccgcgtggcgcgggcgacgcaggcgatcatc
gcgcgcacggggcatgagccgaccatcgaggagctcgagaaggagacgggggttccgcgc
gagaagctcgacaaggtgaaggacttctacgcggagacgcccttctcgctcgatcgtccg
gtcggtgacgaggatggacgcaagttcatcgacttcctccaggaggagaacgcgctgtcg
ccgttcgatcacctggccaacaggaagtggagcgacgaggtccggcgtctcctgaccacg
ctcacgccgatcgagtcgcggatcatccgctggcgcttcggcctcgacgacgaggacgag
ctcacgctcaaggagatcggcgacaagtacaacctgtcgcgcgagcgcatccgtcagctc
caggagcaggcgctcgggaagatccgcaagcagatgcgcgactactga

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