Sorangium cellulosum So ce56: sce7244
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Entry
sce7244 CDS
T00634
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sce7244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce7244
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sce7244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAN97413
UniProt:
A9ESS1
LinkDB
All DBs
Position
complement(10111333..10113480)
Genome browser
AA seq
715 aa
AA seq
DB search
MLLRPRKRTQPCSSARSQRNVSLDRTWIAPSALHSAPRPSSQTGEAGTHAKKGTVFASGA
GLLPGTGAGASFCKSRPASGEKSSTGIKRKHQRLPVSTGAPSVSSSPLFGTKSSRLPSKG
GETFQSRKVSRLEVNADTKTKMSTSTARRPETARRNAKSSAVGASARLAASKSSQGAETA
SAPRRGASQTTELEVSEVEDFGDNQSPRSHFQGATTVEGAAMRSTKSNATVVKGDPLAQG
GTATPEIAALGLLEDDQTEETVVRPRPAEILDEERTADFIDLDLGPLDRLPQPERARNQD
RELKDVEDGGGDSMLARYFRDMALHPVMGPDEELDTARAVERTEVEHWVALLSYLPAAEY
ILTALEEDVAKAGEDEVKAPQIAEMQKLVRLAKKQKGKLLAEQEKPWTQLSEELAAAVRL
PDSDRLWMARAFGIARDLVREPDFEDDVSDPEETRPTRPRLPMSGSYRRYLDRVERSFQA
QHDAKNRFVKANLRLVVSIARRYNRGRLPLIDLIQEGNIGLMKAVERFDHSRGYRFSTYA
SWWIRHAISRALADKGRAVRIPVHMLDTYNRVARATQAIIARTGHEPTIEELEKETGVPR
EKLDKVKDFYAETPFSLDRPVGDEDGRKFIDFLQEENALSPFDHLANRKWSDEVRRLLTT
LTPIESRIIRWRFGLDDEDELTLKEIGDKYNLSRERIRQLQEQALGKIRKQMRDY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgcgtccccgaaagcgtacccagccatgcagctcggctcggtcgcagcgaaac
gtctcgctcgacaggacatggatagcgccttccgctctacatagcgcaccccggccgagc
tctcaaacaggagaagcgggaacgcacgctaaaaaaggcactgtttttgcttctggagct
gggctgctaccggggactggcgcaggagcatcgttctgcaagagcagacctgcctcaggt
gagaagagttcgaccggaatcaaaagaaagcaccagcggttgccagtttcaacaggggct
ccttcggtcagctcctcccctctgtttggcacgaaatcgtctcgcctgccgtcaaaaggt
ggcgagacatttcaatctcgcaaggtcagccgtttagaagtgaacgccgacacaaagacc
aagatgagcacgtcgaccgcccgccgtccagaaactgcgcggagaaacgccaagtcctct
gctgtaggtgcctctgcgcggctcgcggcatccaagagctcgcagggggccgagaccgca
tcggctccccggcggggggcatcgcagaccaccgagttggaggtctccgaggtcgaagat
ttcggggacaaccagtcgccgcgctcgcactttcaaggagctaccaccgtggagggagcc
gccatgaggtcgaccaagagcaacgccactgtagtgaagggcgacccgctcgctcagggt
gggacggccacgccggaaatcgcagcgctcggccttctggaagacgaccagacggaggag
acggttgtgcgaccccgcccggccgagatcctcgatgaggagcggacggccgacttcatc
gatttggacctcgggccgctcgatcggctgcctcagcccgagcgcgcgaggaaccaggat
cgggagctgaaggatgtcgaggacgggggcggtgactcgatgctcgcccgctatttccgc
gacatggcgctccaccccgtcatggggccggacgaggagctcgacaccgcgcgggcggtc
gagcgcacggaggtggagcactgggtggctctgctctcctacctgcctgcggccgagtac
atcctcaccgcgctcgaggaggatgtcgccaaggcgggtgaggacgaggtgaaggctccg
cagatcgcggagatgcagaagctcgttcgcctggcgaagaagcagaagggaaagctgctc
gccgagcaggagaagccgtggacccagctctccgaggagctcgctgcggctgtccgcctg
cctgactcggatcgcctctggatggcgcgtgccttcggcatcgcgcgcgatctcgtgcgc
gagcccgacttcgaggacgacgtgagcgatcccgaggagacccgccccacgcggccgagg
ctcccgatgtctggctcctaccgccgttacctcgatcgggtcgagcgatccttccaggcg
cagcacgacgcgaagaaccgcttcgtgaaggccaacctgcggctcgtcgtgtcgatcgcg
cggcgctacaaccgcgggcgcctgccgctcatcgatctgatccaggaaggcaacatcggc
ctgatgaaggcggtggagcgcttcgaccacagccgtggctaccgcttctcgacgtacgca
tcgtggtggatcaggcatgcgatcagccgcgccttggccgacaagggccgcgctgtccgc
atcccggtccacatgctcgatacgtacaaccgcgtggcgcgggcgacgcaggcgatcatc
gcgcgcacggggcatgagccgaccatcgaggagctcgagaaggagacgggggttccgcgc
gagaagctcgacaaggtgaaggacttctacgcggagacgcccttctcgctcgatcgtccg
gtcggtgacgaggatggacgcaagttcatcgacttcctccaggaggagaacgcgctgtcg
ccgttcgatcacctggccaacaggaagtggagcgacgaggtccggcgtctcctgaccacg
ctcacgccgatcgagtcgcggatcatccgctggcgcttcggcctcgacgacgaggacgag
ctcacgctcaaggagatcggcgacaagtacaacctgtcgcgcgagcgcatccgtcagctc
caggagcaggcgctcgggaagatccgcaagcagatgcgcgactactga
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