Sorangium cellulosum So ce56: sce7918
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Entry
sce7918 CDS
T00634
Symbol
recD
Name
(GenBank) putative exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
sce7918 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce7918 (recD)
Enzymes [BR:
scl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
sce7918 (recD)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sce7918 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_22
nSTAND3
AAA_16
PIF1
PhoH
AAA_5
CATASP
NTPase_1
MeaB
HHH_2
UvrD-helicase
AAA_28
AAA_29
Zeta_toxin
RsgA_GTPase
ABC_tran
AAA
T2SSE
SLFN-g3_helicase
TsaE
ATPase_2
MoCF_biosynth
NACHT
AAA_23
AAA_18
AAA_14
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAN98088
UniProt:
A9FG52
LinkDB
All DBs
Position
11037489..11040008
Genome browser
AA seq
839 aa
AA seq
DB search
MRDVLQRRSRPRTRALPPPRRRLHAALVQPSQRSGRPDRAARGAAAPAPTPGPDNAPRHD
DRGERTGGTGGTGERQPGGGGQQKLFSAREVAGNGAATVEGEVVRVTYESESSGFRVLRV
EVTPGAPPEVWVGVFPQVGPGTRVRATGRYERDPKHGEQLKVETLLPIAPATLDGLERYL
GSGMVQGIGPAYAKRIVEAFGTETLEILDRSPERLAEVPGLGQRRAQAVAKAWAAQRAIG
AIMIFLQAHGASPALASRIYKRFGPHAIDIVSRSPYRLALDVWGIGFKTADRIARSIGVR
ADSPERAQAGVLQTLVDLSTRGHTLAARPELAELAAAMLERDAAEVDSAIDALVASGHVR
VETLETGEVAVYPKDLHEAEVRLARRMRSLLGDDEDDAAPEARLVEGVDAAIAAFEAKTQ
VSLAPAQRDAVAQAARNKVLVITGGPGVGKTTIVRAILALFDRARLPVRLAAPTGRAAKR
MSEATGREAVTLHRLLEFDPKQRKFGRQRGRPIEAGAIVVDEASMLDLALADALLQATSD
GARLVLVGDVDQLPSVGPGAVLRDVIASGEVPTVRLTQIFRQAEGSLIVRNAHRIHDGEP
PEGARGPGGEFYVIERIEAEAAADLILHLVTERIGKGFGLDPRRDVQVLTPMHKGEAGAI
TLNARLQAALNPEGPSVTRGARTLRLGDKVMQLRNDYDREVYNGDVGFITDVNTEERKLQ
VRFDDREVSYEEAEIDELTLAYATSIHKSQGSEYPAVIVPILTQHFVMLSRNLIYTAVTR
GKRLVVLVADPRAVSLALAETRREERRTHLAERLRGGAPARAGSARMLEAPLAAGPRLD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgatgttttgcagcggcgctcgcgtccgcgcacgagggcgttgccgccgccgcgc
cggcggctacatgctgccctcgtgcaaccgtcccagcggagcggccgccccgatcgagcg
gcccggggggcagccgcgccggcgccgacgccggggccggacaacgcgccgcgccacgac
gatcgcggcgagcgcacgggcgggacgggcgggaccggtgagcggcagccgggcggtggg
ggccagcagaagctcttctcggcccgggaggtggcgggcaacggggcggcgacggtcgag
ggagaggtcgtccgcgtcacgtacgagagcgagtcgagcggcttccgggtgctgcgggtg
gaggttacccccggcgccccgccggaggtctgggtcggcgtgttcccgcaggtcgggccg
ggcacgcgcgtgcgcgcgacggggcgctacgagcgcgatcccaagcacggcgagcaactc
aaggtcgagaccctgctgccgatcgcccccgccacgctcgatgggctcgagcgctacctc
gggtccggcatggtgcagggcatcggcccggcgtacgcgaagcggatcgtggaggcgttc
ggcacggagacgctggagatcctcgaccggtcgccggagcggctcgccgaggtccccggg
ctcggccagcggcgcgcgcaggcggtcgcgaaggcgtgggcggcgcagcgggcgatcggg
gccatcatgatcttcctccaggcgcacggcgcctccccggcgctggcgagccgcatctac
aagcggttcggcccccacgcgatcgacatcgtctcccgctccccgtaccggctcgcgctc
gacgtgtggggcatcggcttcaagaccgccgaccggatcgcgcgctcgatcggcgtccgg
gccgactcgccggagcgggcgcaagcgggcgtgctgcagacgctggtcgatctgtcgacg
cgcggccacacgctggcggcgcggccggagctcgcggagctcgcggcggcgatgctcgag
cgcgacgccgccgaggtcgacagcgcgatcgacgcgctcgtggcgagcggccatgtgcgg
gtcgagacgctcgagaccggcgaggtggccgtctacccgaaggacctccacgaggccgag
gtgcggctcgcgcgccggatgcgctccttgctgggcgacgacgaggacgacgcggcgccc
gaggcgcgcctcgtggagggcgtcgacgcggcgatcgccgcgttcgaggcgaagacgcag
gtctcgctggcgcctgcccagcgggacgccgtggcgcaggcggcgcggaacaaggtgctg
gtcatcacgggcggccctggcgtgggcaagacgaccatcgtccgggccatcctggcgctc
ttcgaccgcgcccggctcccggtgcggctcgccgcgcccacgggccgcgccgcgaagcgg
atgagcgaggcgacggggcgggaggccgtcacgctccaccgcctgctggagttcgatccc
aagcagcgcaagttcggccgccagcggggccggccgatcgaggcgggggccatcgtggtc
gacgaggcgtcgatgctcgacctggcgctcgccgacgcgctcctgcaggcgacgtccgac
ggcgcgcgcctcgtgctggtgggcgacgtcgatcagctcccgtcggtggggccgggcgcg
gtgctgcgggacgtgatcgcctccggcgaggtgcccacggtgcggctcacgcagatcttc
cgccaggccgagggcagcctcatcgtccggaacgcgcaccgcatccacgacggcgagccg
ccggagggcgcgcgcgggcccggcggcgagttctacgtgatcgagcggatcgaggccgag
gcggcggcggatctgatcctccacctcgtgacggagcgcatcggcaaggggttcgggctg
gatccgcggcgcgacgtccaggtcctgacgccgatgcacaagggcgaggcgggggcgatc
acgctgaacgcgcggctgcaggcggcgctgaaccccgagggtccgagcgtcacgcgcggc
gcgaggacgttacggctcggcgacaaggtgatgcagctccgcaacgactacgaccgtgag
gtgtacaacggcgacgtcggcttcatcacggacgtgaacaccgaggagcggaagctccag
gtgcgcttcgacgatcgcgaggtcagctacgaggaagcggagatcgacgagctgacgctc
gcgtacgcgacgagcatccacaagagccaggggagcgagtatccggcggtgatcgtgccg
atcctcacccagcatttcgtgatgctgtcgcgcaacctcatctacacggcggtgacgcgc
ggcaagcggctcgtggtgctcgtggcggatccgcgggcggtgtcgctggcgctggcggag
acccgccgtgaggagcgccgcacccacctcgcggagcggctgcgcggcggcgcgccggcg
cgcgctggctcggcgcgcatgctcgaggcccccctcgccgccggcccacgactcgactag
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