Sorangium cellulosum So ce56: sce7936
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Entry
sce7936 CDS
T00634
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sce7936 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce7936 (rpoA)
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce7936 (rpoA)
Enzymes [BR:
scl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sce7936 (rpoA)
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sce7936 (rpoA)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sce7936 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
CAN98106
UniProt:
A9FGB8
LinkDB
All DBs
Position
complement(11063560..11064600)
Genome browser
AA seq
346 aa
AA seq
DB search
MTMNNPNLTMIARNWRDLIRPKGISIDAESGTQFYAKFTCEPLERGFGITIGNSLRRVLL
SSLQGAAATAIRIEGALHEFTTVPDVVEDVSDIILNVKEVVFKAATPKTYSVRIDREGPG
PVYARDIQLVEGLSVLNPDHLIAVLDKKGPLSMELTVNVGRGYVPAERNKTPTMPIGTIP
IDALFSPIRKVNYTVQNARVGQVTDYDKLTLEVWTNGSVSPADAVAFAAKILKEQLSIWV
NFEESEETSYQAVMSDDEPLNENLFRSVEELELSVRSANCLQNANITLIGELVQRTEQDM
LKTKNFGRKSLKEIKEILANMGLSLGMKIDNWPQLLERWKAQQAQA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaacaacccgaacctcacgatgatcgcccgtaactggcgcgatctgatccgg
cccaagggcatctcgatcgacgcggagagcgggacccagttctacgccaagttcacgtgt
gagcccctggagcgcggcttcgggatcacgatcggcaactcgctgcgccgcgtgctgctc
tcctccctccagggggcggccgcgacggccatccgcatcgagggcgcgctgcacgagttc
accaccgtgccggacgtggtcgaggacgtcagcgacatcatcctcaacgtgaaggaggtc
gtcttcaaggcggccaccccgaagacgtactcggtgcgcatcgatcgggaggggcccggg
cccgtgtacgcgcgcgacatccagctggtcgagggcctgtcggtgctcaaccccgaccac
ctcatcgccgtgctcgacaagaagggcccgctctcgatggagctcacggtcaacgtgggc
cgcggctacgtgcccgccgagcgcaacaagacgccgaccatgccgatcgggacgatcccg
atcgacgcgctgttctcgccgatccgcaaggtgaactacaccgtgcagaacgcccgcgtc
gggcaggtgaccgattacgacaagctcacgctcgaggtctggaccaacgggtccgtctcg
ccggcggacgcggtcgccttcgccgcgaagatcctcaaggagcagctctccatctgggtc
aacttcgaggagagcgaggagacgagctaccaggcggtgatgagcgacgacgagccgctc
aacgagaacctgttccgctccgtcgaggagctcgagctgagcgtccgctccgcgaactgc
ttgcagaacgcgaacatcacgctcatcggcgagctcgtgcagcggaccgagcaggacatg
ctcaagaccaagaacttcggtcgcaagtcgctgaaggaaatcaaagagatcctcgcgaac
atggggctctcgctcgggatgaagatcgacaactggccgcagctcctcgagcgctggaag
gcgcagcaggcgcaggcgtga
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