Sorangium cellulosum So ce56: sce8000
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Entry
sce8000 CDS
T00634
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl00010
Glycolysis / Gluconeogenesis
scl00020
Citrate cycle (TCA cycle)
scl00260
Glycine, serine and threonine metabolism
scl00280
Valine, leucine and isoleucine degradation
scl00310
Lysine degradation
scl00380
Tryptophan metabolism
scl00620
Pyruvate metabolism
scl00630
Glyoxylate and dicarboxylate metabolism
scl00640
Propanoate metabolism
scl00670
One carbon pool by folate
scl00785
Lipoic acid metabolism
scl01100
Metabolic pathways
scl01110
Biosynthesis of secondary metabolites
scl01120
Microbial metabolism in diverse environments
scl01200
Carbon metabolism
scl01210
2-Oxocarboxylic acid metabolism
scl01240
Biosynthesis of cofactors
Module
scl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
scl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
sce8000 (pdhD)
00020 Citrate cycle (TCA cycle)
sce8000 (pdhD)
00620 Pyruvate metabolism
sce8000 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
sce8000 (pdhD)
00640 Propanoate metabolism
sce8000 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
sce8000 (pdhD)
00280 Valine, leucine and isoleucine degradation
sce8000 (pdhD)
00310 Lysine degradation
sce8000 (pdhD)
00380 Tryptophan metabolism
sce8000 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
sce8000 (pdhD)
00670 One carbon pool by folate
sce8000 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scl04147
]
sce8000 (pdhD)
Enzymes [BR:
scl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
sce8000 (pdhD)
Exosome [BR:
scl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
sce8000 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_binding_2
Pyr_redox_3
HI0933_like
NAD_binding_8
DAO
GIDA
FAD_oxidored
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
CAN98170
UniProt:
A9FH02
LinkDB
All DBs
Position
complement(11130410..11131816)
Genome browser
AA seq
468 aa
AA seq
DB search
MKTYDAIVIGAGPGGYPCAIRLAQLKQKVLCIEKENVGGVCLNWGCIPSKALISAAHLYE
KSQAGAAMGIKVSGVELDANKMQDWKEGIVKKLTGGVGSLLKGNGADVVNGTATVVGPKR
VDVTRADGSVEQFEATKAIVIATGSTTIEIPTFKFDGDTIIGAKEAVSLRRIPKRLMVIG
GGVIGLELGMVYQAFGAELIVVEALPELLTGVDPDCTKIVERKILKRGGTIHKNAKALGY
EKQKDGSVGVKILADGKEQTIVVDTVLVAVGMRPSSKGLGLEKVGVTVDQRGFVPTDKFC
RTNVPSIYAIGDVSGPPLLAHKATKEGEIAAEVIAGHKAEKDWVAIPGAIFTDPEIATVG
LTEAEAKAKGLEVSIGKFPFSVLGKAMAMNETEGFVKIVADKKTKQVLGVHIVGPEASTM
ISEASLSLEMAAFLEDLSLTIHPHPTLGESLMEAAAHAMGAAIHIANR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctacgacgcaatcgtgatcggagccggccccggcggttacccctgcgccatc
cggctcgctcagctcaagcagaaggtgctctgcatcgagaaggagaacgtcggcggcgtc
tgcctcaactgggggtgtatcccctccaaggcgttgatctccgccgcccacctctacgag
aagtcgcaggccggcgccgcgatgggcatcaaggtcagcggcgtcgagctcgacgccaac
aagatgcaggactggaaggaaggcatcgtcaagaagctcaccggcggcgtcgggtcgctg
ctcaagggcaacggcgccgacgtcgtgaacggcaccgccacggtcgtggggccgaagcgc
gtggacgtgacgcgggcggacggctccgtggagcagttcgaggcgaccaaggcgatcgtg
atcgcgaccggctcgacgaccatcgagatcccgacgttcaagttcgacggcgacacgatc
atcggcgcgaaggaggcggtcagcctgcgccgcatcccgaagcggctgatggtgatcggc
ggcggcgtcatcggcctcgagctcggcatggtctaccaggcgttcggcgccgagctcatc
gtcgtcgaggcgctgccggagctgctcacgggcgtcgaccccgactgcaccaagatcgtc
gagcgcaagatcctgaagcgcggcggcacgatccacaagaacgccaaggcgctcgggtac
gagaagcagaaggacggctcggtcggggtgaagatcctggccgacggcaaggagcagacg
atcgtcgtcgacaccgtgctcgtcgccgtcggcatgcggccgagcagcaaggggctcggc
ctcgagaaggtcggcgtgacggtcgatcagcgcgggttcgtccccacggacaagttctgc
cgcaccaacgtgccgtcgatctacgccatcggcgacgtcagcgggccgccgctgctcgcg
cacaaggcgacgaaggagggcgagatcgccgccgaggtcatcgcggggcacaaggccgag
aaggactgggtcgcgatcccgggcgcgatcttcaccgatccggagatcgccacggtgggg
ctcaccgaggcggaggcgaaggcgaagggcctcgaggtcagcatcggcaagttcccgttc
tcggtgctcggcaaggccatggccatgaacgagaccgagggcttcgtgaagatcgtcgcc
gacaagaagacgaagcaggtgctcggcgtccacatcgtcggaccggaggccagcaccatg
atcagcgaggcgtccctctcgctcgagatggcggccttcctcgaggatctctcgctcacg
atccacccccacccgaccctcggcgagtcgctgatggaagccgccgcccacgccatgggc
gcggcgatccacatcgccaaccgctga
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