Sorangium cellulosum So ce56: sce8012
Help
Entry
sce8012 CDS
T00634
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl00061
Fatty acid biosynthesis
scl00071
Fatty acid degradation
scl01100
Metabolic pathways
scl01212
Fatty acid metabolism
scl02024
Quorum sensing
Module
scl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
sce8012
00071 Fatty acid degradation
sce8012
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sce8012
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scl01004
]
sce8012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scl04147
]
sce8012
Enzymes [BR:
scl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
sce8012
Lipid biosynthesis proteins [BR:
scl01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
sce8012
Exosome [BR:
scl04147
]
Exosomal proteins
Exosomal proteins of breast milk
sce8012
Exosomal proteins of breast cancer cells
sce8012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Acyltransferase
Sterile
SCP2
Epimerase
AMP-binding_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAN98182
UniProt:
A9FH48
LinkDB
All DBs
Position
11144127..11148719
Genome browser
AA seq
1530 aa
AA seq
DB search
MSHMGVTNGAGAGEAAPGSPGGAKGEETAAAPPLVPSHVLSGKRLVVVGGTGFLGKVWLA
MLLARFPEIAHIYLLVRAKENQSPEERFWSQIVTSPVFDPIREQYPGPAFEEYLRQKITP
MNGNVGLPLLGLGDRVGELTGNIAAVVNVAGVVDFNPPLDEALEVNAFGISNLVELARTL
GAKVMHTSTCFVAGYRSGLIEENHPSEIPFPRAAGETWFGAACPKRTLDRSHWDPQREIS
ECLDLVQQARQRCEDAFRQSAFLDEAKANLAARSEPCRGSALENELARVKRKFIKDRLIE
AGKERALFWGWTNIYTYTKSIGEQVLASSGLPFTIVRPAVVETAVEFPFTGWNEGINTSA
PYLYLASKGQVQFPGDHDVRLDLIPVDMTASGMIASLCELIEGRAPAVYQYGSTDTNGCR
VTRYLELAGLYKRRQVFEGKKTSLFDVVSSRFEPRGLTRQQYGAHGARAIEGALRGLGGL
LKTASVGPAAALLKPAAAALENAARTEQKTATLLEVFMPFVAEGDWVYSCANTRAAMARM
PPEERARFVWAPEKIDWRDYIWNVHLPGLEKWAFPLMEEMLRREIKPLRPYDSLVDLLDE
VAERFDHALSVQRFEQDGLSRTSYRELRDAACMTAARLAALGVRRGDRVALSGANQPAWP
VAYFGILRAGAVAVPIDPGLDAKAFADVLRSSTAKVVLWDGGVAERLGADVRAALPNLHA
FDMVGFAEGQVPDLGPASGDGLAPPDVRVGSQDVASVVYTSGTTGEPKGVLLTHGNFTAL
LASLAPLFPLKASDRVLSVLPLHQTFEVTCGLLLPLSQGARIIYLDEVSADRVSDGLKKA
RVTAMVGVPALWQMLERQIVARVKEQGPAAATAFSWAMELNRMLGKRLGLNAGRLFFGSV
HDALGGNVRFLISGGAALPRDTAAVFKGLGLPLAEGYGLTEAAPLLTVTKPSPAASPGNV
GKPIPGVKIKIANPDANGVGEVLARGPNVMKGYADDPDATQAALDADGWLRTGDLGKLDK
QGRLVLVGRQSEVISAAKGESLYPADIERMLGKIEHVKELAIVGIDNGRGGEQVACLAVP
TAPGAKDGEGDPALARAAQHERALDALRTAIQALPKPCHPMAVHLDDADLPRTASGQVKR
SEVKAIVTRLAAEAAAAGAGAAAVAQDAGAATAEPKAHSAGDEPIHIPRPVADFAKHWMN
KVQSGFYGNVMRPKVYGRAFIPHNRNTIVVSNHASHLDMGLVKFALGSYGDGLVSLAAQD
YFFEGNRWRRAYFENLTNLAPFDRKGGLRTALRQTGEILDRGRTVLLFPEGTRSPDGGIL
EFKPAIGHLALTHNVDILPLYLGGTFEALPKGRTVPIRRDLVARIGPPLAIGDLRRLTAG
MKYAVACRKVAELTQLAVIKLKEGGALDLSRVESIDQAATTAKEHPLTLLFRELESKYVA
GRVAQPITYYVTLGTEDEAKWTLRIDAASCEARIGKPSQQADCVLKTTPEIFTKIVREAY
TPSPMEFMTGLVKSNDISLLQTFQKVFDLA
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagccatatgggtgttacgaacggggccggcgccggagaggcagcgccggggtcgccg
ggtggggccaagggcgaggaaaccgcggcggccccgccgctggtgccgtcgcacgtgctc
tcgggcaagcggctcgtggtggtcggagggaccggcttcctcggcaaggtctggctggcc
atgctgctcgcgaggttcccggagatcgcccacatctacctgctcgtccgggccaaggag
aaccagtcgccggaggagcgcttctggtcgcagatcgtgacctcgccggtcttcgacccg
atccgcgagcagtaccccgggcccgccttcgaggagtacctgcggcagaagatcacgccc
atgaacggcaacgtcggcctgccgctgctcgggctgggcgaccgcgtgggtgagctcacg
ggcaacatcgccgcggtcgtgaacgtggccggcgtcgtcgacttcaacccgccgctcgac
gaggcgctcgaggtcaacgcgttcggcatcagcaacctcgtcgagctcgcgcggaccctc
ggggccaaggtgatgcacacgagcacctgcttcgtcgcaggctaccgctccgggctcatc
gaggagaaccacccgtccgagatccccttcccccgcgccgcgggcgagacgtggttcggc
gccgcctgcccgaagcggaccctcgatcggtcgcactgggatccgcagcgcgagatcagc
gagtgcctcgacctcgtgcagcaggcgcgccagcggtgcgaggacgccttccggcagagc
gccttcctcgacgaggccaaggccaacctggccgcgcgcagcgagccgtgccggggcagc
gcgctcgagaacgagctcgccagggtgaagcgcaagttcatcaaggaccggctcatcgag
gccggcaaggagcgcgcgctcttctgggggtggaccaacatctacacctacacgaagagc
atcggcgagcaggtcctcgcgagctccgggctgcccttcaccatcgtccgccccgccgtc
gtcgagaccgccgtcgagttcccgttcaccggctggaacgaggggatcaacacctcggcg
ccgtacctctacctcgcctcgaaggggcaggtgcagttcccgggcgaccacgacgtgcgg
ctcgacctcatcccggtcgacatgaccgcgagcggcatgatcgcctcgctctgcgagctc
atcgagggccgcgcgcccgcggtgtaccagtacggatcgaccgacacgaacggctgccgc
gtgacgcgctacctggagctcgccgggctctacaagcggcggcaggtgttcgaggggaag
aagacctcgctcttcgacgtcgtgtcatcccggttcgagccgcgcgggctgacccggcag
cagtacggcgcgcacggcgcgcgcgccatcgagggcgcgctccgcggcctgggcggcctg
ctcaagacggcgagcgtcggccccgccgcggccctcctcaagccggcggctgccgcgctc
gagaacgccgccaggaccgagcagaagacggccacgctcctcgaggtcttcatgccgttc
gtcgccgagggcgactgggtctactcctgcgccaacacgcgcgcggcgatggcccgcatg
ccccccgaggagcgggcgcgcttcgtctgggcccccgagaagatcgactggcgtgactac
atctggaacgtccacctccccggcctggagaagtgggccttcccgctcatggaggagatg
ctccgccgggagatcaagccgctccggccctacgacagcctggtcgacctgctcgacgag
gtcgccgagcgcttcgatcacgcgctctcggtgcagcggttcgagcaggacgggctctcg
cgcacgagctaccgcgagctccgcgacgcggcctgcatgaccgccgcgcgcctcgccgcg
ctcggcgtccgccgcggcgatcgcgtggcgctctccggcgcgaaccagccggcgtggccc
gtcgcctacttcggcatcctccgcgcaggcgccgtcgccgtcccgatcgatcccgggctc
gacgcgaaggcgttcgcggacgtcctccgctcgtcgacggcgaaggtcgtcctctgggac
ggcggcgtggcggagaggctcggcgccgacgtgcgcgcggcgctgccgaaccttcacgcc
ttcgacatggtcgggttcgccgagggccaggtgcccgacctgggcccggcctccggcgac
gggctcgcgcccccggacgtgcgcgtgggcagccaggacgtcgcgagcgtcgtctacacg
agcggcacgaccggggagccgaagggcgtgctgctgacgcacggcaacttcacggcgctg
ctggcctcgctggcgccgctgttcccgctcaaggcgagcgaccgcgtgctcagcgtgctg
ccgctccaccagaccttcgaggtcacctgcggcctgctcctgccgctgtcgcagggcgcg
cggatcatctacctcgacgaggtctcggccgatcgggtgagcgacgggctgaagaaggcg
cgcgtcacggcgatggtcggcgtgcccgcgctctggcagatgctggagcgccagatcgtc
gccagggtgaaggagcaggggcccgccgcggccaccgcgttcagctgggccatggagctg
aaccgcatgctcggcaagcgcctgggcctgaacgcggggcgcctcttcttcggcagcgtc
cacgacgcgctcggcggcaacgtccgcttcctcatctcgggcggcgcggcgctccccagg
gacacggccgccgtgttcaaggggctcggcctgccgctcgccgagggctacggcctgacc
gaggcggcgccgctcctgaccgtcaccaagccctcgccggcggcgagcccggggaacgtc
ggcaagccgatccccggggtgaagatcaagatcgcgaacccggacgcgaacggcgtcggc
gaggtgctcgcgcgcggccccaacgtcatgaagggctacgccgacgacccggacgcgacc
caggcggccctcgacgcggacgggtggctccgcacgggcgatctcggcaagctcgacaag
caagggcggctcgtcctcgtcggccggcagagcgaggtcatcagcgcggcgaagggcgag
agcctgtacccggccgacatcgagcgaatgctcggcaagatcgagcacgtcaaggagctc
gccatcgtcgggatcgacaacggccgcggcggcgagcaggtcgcctgcctcgccgtcccc
accgcgccgggcgcgaaggacggcgagggcgacccggcgctcgcgcgggccgcgcagcac
gagcgcgcgctcgacgcgctccggacggcgatccaggcgctgcccaagccgtgccacccc
atggccgtccacctcgacgacgccgacctgccccgcaccgcgtccggccaggtgaagcgc
tccgaggtgaaggcgatcgtcacgcgcctcgccgccgaggccgccgcggccggcgcgggc
gcggcggccgtcgcgcaggacgccggcgcggcgaccgcggagccgaaggcgcacagcgcg
ggcgacgagccgatccacatcccccgcccggtggccgacttcgccaagcactggatgaac
aaggtccagtccggcttctacgggaacgtcatgcgcccgaaggtctacgggcgcgcgttc
atcccgcacaaccgcaacacgatcgtcgtctcgaaccacgcgagccacctcgacatgggc
ctcgtgaagttcgcgctgggcagctacggggacggcctcgtctcgctggccgcgcaggac
tacttcttcgagggcaaccgctggcggcgcgcctacttcgagaacctcacgaacctcgcg
cccttcgaccgcaagggcggcctccgcacggcgctgcgccagaccggcgagatcctggac
cgcgggcggacggtgctcctcttcccggagggcacgcgcagccccgacggcggcatcctc
gagttcaagccggcgatcgggcacctcgcgctcacccacaacgtcgacatcctgcccctc
tacctgggcggcaccttcgaggcgctccccaaggggcgcaccgtcccgatccgccgcgac
ctcgtcgcgcgcatcgggccgccgctcgcgatcggcgacctccggcggctcaccgccggg
atgaagtacgcggtggcctgccgcaaggtcgcggagctcacgcagctcgccgtcatcaag
ctcaaggagggcggcgccctggatctgagccgggtcgagagcatcgatcaggccgccacc
accgccaaggagcacccgctcacgctcctgttccgcgagctcgagtcgaaatacgtggcg
gggcgggtcgcccagccgatcacctactacgtgacgctcggcacggaggacgaggcgaag
tggacgctgcggatcgacgcggccagctgcgaggcgcggatcggtaagccaagccagcaa
gcggactgtgtcctcaagaccacgcccgagatattcaccaagatcgtccgcgaggcctac
acgccgagcccgatggagttcatgacgggcctcgtgaaatcgaacgacatctccctcctg
cagaccttccagaaggttttcgacctcgcatga
DBGET
integrated database retrieval system
