KEGG   Sorangium cellulosum So ce56: sce8196
Entry
sce8196           CDS       T00634                                 
Name
(GenBank) Putative Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:scl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    sce8196
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scl02044]
    sce8196
Secretion system [BR:scl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   sce8196
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V PG_binding_1 DUF6484 Bact_transglu_N DUF1455
Other DBs
NCBI-ProteinID: CAN98366
UniProt: A9FMV8
LinkDB
Position
11408143..11410785
AA seq 880 aa
MSNGAPHPSTFELRAGSLAARDLTVLAFRGRESISRGYRVDIDVAAPFADPAAFEPQILE
QPMHLALQGEGAPLRVFHGVCTHVAWSAALDDGRSAYRLRLASRLSLLGRRRASRIFQDR
TVDAIVDLVLEEWRIPRRFARVRAAPKRAYCVQYRETDRDFVTRLLAEEGLFYYFEHDPS
ADAERMVIGDDASIYPPITGAPRLFHRSAPAGTGALTPGEDHVQRFVAARSVRPTASVVR
DYDFERPLFHPSSSARTAQLDGGAEDGRYEHYEHHGDYEKVEVAREDATIRLEQLRRKAV
VARGETACRRLVPGRRFFLEEHDVAAYDRGWVVTRVDHEGEAPQISGASPTYRARFACAP
DTVCVRPRPAPRRIQQVVETATVVGPPGEEVHTDAFGRIKVQFHWDREGQGDDRSSCWIR
HAELWAGRGFGTQFVPRVGMEVVVSFLGGDVDRPIVTGCVANAVNRAPFQLPDARTRSGV
KTRSSPNGGGHNELSFEDRKGSELVHLRAERELDVRVGTDQRVGVGGDRSVAVAGRDALD
TGDRLTKVRRDDDLEVEGRRSVRVFGESEEHVLGDRALRVDGIDKTNLLGGSVLTVEGPS
ILRVTGEYSIDVGTGDDAGAAQINVSGSLVLGGSKSLRLITQGSLTLSAGESSLEISPEG
IRIMAGRVEIAGAQALSLAGKGPTLSLGEEAELAAKKIRMFSTDAALELDEDAALWGKLV
KLNCSRDEPPPGGDEDEEKTKPFNVQLTDEELEPYGGKRYQLVAEGRRFEGETDVDGAIA
VEIPETAQLVEITMWPGKYPTGPRKKWTVRVAALPEATTVEGALRRLKNLGYYEGAIKED
PPADKGFRAALAWFQKDHELGESGELDAQTAGELVRVHGS
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtcgaatggggcgcctcatccatccaccttcgagcttcgcgctggctctctcgccgcg
cgagacctcacagtgctcgcgtttcgcggtcgcgagtccatctcgcgcggctaccgggtc
gacatcgatgttgccgcgccgttcgccgatccggcagccttcgagccgcagatcctcgag
cagccgatgcatctcgcgctccagggcgagggcgctccgctccgcgtgtttcatggcgtc
tgtacccacgtggcgtggagcgcggcgctcgacgacggccggagcgcgtaccggctccgc
ctcgcctcgcgcctgtcgttgctcggcaggcgccgcgctagccgcatcttccaggacagg
accgtcgacgcgatcgtcgacctcgtcctggaggaatggcgcatcccccgccgcttcgca
cgggtccgcgccgctccgaagcgcgcctattgcgtgcagtaccgcgagaccgaccgcgac
ttcgtgacgcgcctcctcgcggaggaagggctcttctactacttcgagcacgaccccagc
gccgacgccgagcggatggtgatcggcgacgacgcgagcatctatccgccgatcaccggc
gccccgcggctcttccataggagcgcgccggcaggaaccggcgccctcacgcccggcgag
gaccacgtccagcggttcgtcgcggcgcgctcggtccggccgacggcatccgtcgtccgc
gactacgacttcgaacgtccgctgttccacccctcctcatcggcgaggacggcgcagctc
gacggcggcgcggaggacggccggtacgagcactacgagcaccatggcgactacgagaag
gtggaggtcgctcgcgaggacgcgacgatccggcttgagcagctgcgccggaaggccgtg
gtcgcccgcggggagaccgcgtgccggcggctcgtgcccggccgccgcttcttcctggaa
gagcacgacgtcgcggcgtacgaccgaggctgggtcgtgacgcgcgtcgaccacgagggt
gaggcgccgcagatctcgggcgcttcgcccacctaccgcgcccgcttcgcctgcgcgccg
gatacggtttgcgtccggccgcgccccgcgccgcggcgcatccagcaggtcgtcgagact
gcgaccgtcgtgggcccgccgggcgaggaggtgcacaccgacgcgttcggtcgcatcaag
gtccagttccactgggaccgcgagggccagggggacgatcggagctcgtgctggatccgc
cacgccgagctctgggcggggcgcggcttcggcacccagttcgttccgcgcgtcggcatg
gaggtggtcgtctcgttcctcggcggcgacgtcgatcgcccgatcgtgaccggctgcgtc
gccaacgcggtgaaccgcgcgccgttccagctcccggacgccaggacccggagcggcgtg
aagacgcggagcagtccgaacggcggcggccacaacgagctcagcttcgaggaccggaag
ggcagtgagctcgtccacctgcgcgccgagcgcgagctcgacgtccgtgtcgggaccgat
cagcgggtcggtgtcggaggcgaccgctctgtcgcggtggccggccgcgacgcactcgac
acgggcgatcggctcacgaaggttcgccgcgacgacgacctcgaggtcgagggccggagg
agcgtccgcgtcttcggcgagagcgaggagcacgtgctcggcgaccgcgcgctgcgcgtc
gacgggattgacaagaccaacctcctcggcggctcggtcctcaccgtcgaggggccgtcc
atcctccgcgtcacgggcgagtacagcatcgatgtcggcacgggcgacgacgccggcgcg
gcgcagatcaacgtctcgggctcgctggtgctcggcggctcgaagtcgctgcgcctcatc
acgcaggggagcctcaccctctccgcgggcgagagctccctcgagatcagcccggagggg
atccggatcatggccggcagggtggagatcgccggcgcgcaagcgctctcgctggcgggc
aagggaccgaccctgtcgctcggggaagaggcggagctcgccgccaagaagatccgcatg
ttctccaccgacgcggcgctggagctcgacgaggacgccgcgctgtggggcaagctagtg
aagctcaactgctcgcgcgacgagccgccgcccggcggcgacgaggacgaggagaagacg
aagccgttcaacgtgcagctcacggacgaggagctcgagccgtacggaggcaagcgctac
cagctcgtcgccgagggccggcggttcgagggcgagacggacgtggacggggcgatcgcg
gtggagatcccggagacggcgcagctcgtcgagatcacgatgtggccagggaagtacccg
acgggccccaggaagaagtggacagtgcgcgtcgccgcgctgcccgaggcgacgacggtg
gagggggcgctgcgacggctgaagaacctcggttactacgagggggcgatcaaggaggac
cctccggcggacaaggggttccgcgcggcgctcgcgtggttccagaaggaccacgagctc
ggggagtcaggggagctcgacgcgcagacggcgggcgagctcgtgcgcgtacacggcagc
tga

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