Sorangium cellulosum So ce56: sce8391
Help
Entry
sce8391 CDS
T00634
Name
(GenBank) WD-repeat protein
Organism
scl
Sorangium cellulosum So ce56
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
RMC1_N
PROPPIN
Pentapeptide
Cytochrom_D1
NACHT
PNP_UDP_1
Nup160
Pentapeptide_4
AAA_16
AAA_25
Pentapeptide_3
AAA_22
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
CAN98561
UniProt:
A9FTS8
LinkDB
All DBs
Position
11680540..11685819
Genome browser
AA seq
1759 aa
AA seq
DB search
MPCVAKARHDTAEARDEGRGGADAGAEVDVGPIDVLVVVALQDELEGVLAQGDGGAAGWR
ELRDLGGFRYYRRAFPSAHGGSLAVAAAWIGEAGQRTAAIRGQQLVSELDPACLAMCGIC
AGDPRKVALGDVIVADRLYSFDEGKRVAPPGKEAELLHDLRTFDLAATWKMDAAFLAREL
DLAALSRERPPSREAQQRWLLDALHAHEAEGGPSPVSHPDRRRACPGWTARLKEAVKDGV
AAMKGGALRLTEAGREKALEERLLHPDGPPADPPLCVHVGAVATLTAVAQDPGVWGDLQR
VVRGTLGLEMEGAAIGDLAGRCQKRSIFVKAVSDHADLAKDDGFRAFACRASAAVLVAFL
QKHLEPAPRPERELPGRRGPAGEVDCTSGDGERGERAFEERHDGFLQRIERVALLRTPGA
TVTRHRTQPPFAGVLEVAARDGSLVDLRVIGALDQSITEELVARYVTEVERPFREQDPLL
RSTLIHAGPQAPPALIERAWRRGVVLKSFSEYQGLIDFGRYLVRQTDRLEADPIYPPWLY
VEQPAVVSLGDREKSATESALASLWELLDAPRRRFVLVLGDFGAGKTFLLHELARRMVRE
GHPLVPVLIEMSRLEKQRSLNVLVAQHFALADEPIDPRAFGYMLAEGRIALLFDGFDELA
LRLTYDRALEHFETVMQAAEGIAKVVVTSRTQHFLDDRQIEQELARRAEQVQGYRLVQLE
GFGEPQIRRFLGNLIPEPAEAEARYRLLHEVSDLLGLSENPRMLGFIAKIEERKLLEAKE
GTGEITTAKLYELLVEQWLDHEHRRANPRGAPRGISREALRGAMTELARLLWDRRARAVG
IAELPESLVKGVQPKDGPPLERAMVEFLIGSGSLLVRDAEGAFSFVHRSVLEWLVAEAAA
REVKDTGDSAALAADEMSELMVDFFVSLAGREQAAAWAARVLHGAAKGHAKDNGLRIVRL
LEKSEQGAAVVGEDEIEVVEGVNLAGQDLSGQNLNRADLRSANLARANLTNAALVEARLA
GASLLSARLGRADLRNASLMGADLRGADLSFARLVDADLTGADLAGATLRGAKLVGARGV
AVASLVAEGAAPPRPSGADLMWIPASSCNAVAWNPSGDLLATGHGDGSVRLWDVVSGRAI
RGIAGHLGPVNSVAFSPDGRTLASGSDDSSVMLWKVESGRVLRVFDGHGVGVRSVVFSPD
GRTLASGAGRAMRLWKVESGHVLRVFEGHGNWVNSVVFSPDGRTLASASDDMTVRLWEVE
SGRALRVFEGHGLMVTSVAFRPDGRTLASGSRDMTVRLWEVESGQVLRVIEGHGARVNSV
VFSPDGLTLASGSNDTSVRLWEVDSGQVLRVFESHGHDVMSVAFSPDGRTLALEPNDTTV
RLWEVESGRVLRTLGGHGKAVTSVAFSPGGRTLASGSHDTNVRLWEVESGRALRVLESHS
HHVMSVAFSPDGRTLASGSHDTTVRLWEVESGRALSTLGGHVKAVTSVVFSPDGRMLASG
SNDTTVRLWEVESGRALRVFEGHGKAATSVVFSPDGRTLASGSNDTTVRLWEVESGRVLR
TFGGHGKVVTSVVFSPDGRTLASGSNDTTVRLWEVESGRALLVFEDHGKGATSVAFSPDG
RTLASGSYDTMVRLWEAGSGRFLGALRGHTAPVVSVSFSPDGTLLASASSDGTLRLWRVA
TGRCLAILLPCAEGWAAFTPDGRYRFGGDIAGSFWHVIGLCRFEPGELEPYLPSPLRLPD
GEPLIALPPAGTPPGSGMA
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcgtggcgaaggcgcggcacgacacggcggaggcgcgggacgagggtcgggga
ggcgcggacgcaggcgcggaggtcgacgtcgggccgatcgacgtgctcgtggtcgtggcg
ctccaggacgagctcgagggggtgctcgcgcagggcgatggcggcgccgcggggtggcgc
gagctgcgggacctcggcggctttcgttactaccggcgcgcctttccgagcgcccatggc
gggtcgctcgcggtggccgcggcgtggatcggcgaggcgggccagcgcacggcggcgatc
cggggacagcagctcgtctccgagctcgatcctgcgtgcctcgcgatgtgcggcatctgc
gcgggcgacccccgcaaggtggcgctcggcgacgtgatcgtggccgaccggctctacagc
ttcgacgagggcaaacgcgtcgcgccgccgggcaaggaggcggagctcctccacgacctg
cgcaccttcgatctcgcggccacgtggaagatggacgccgccttcctcgcgcgcgagctc
gacctcgcggcgctctcccgcgagcgcccgccctcccgggaggcccagcagcggtggctg
ctcgacgcgctccacgcgcacgaggcggagggcgggccctcgccggtctcgcaccccgac
cggaggcgcgcctgtcctgggtggaccgcgcggctcaaggaggcggtgaaggacggggtc
gccgcgatgaagggcggcgcgctgcgcctcaccgaggcagggcgggagaaggcgctggag
gagcggctgctccacccggacggtccgccggccgatccgccgctctgcgtgcacgtcggc
gccgtcgccacgctcacggcggtggcgcaggatccgggcgtctggggcgacctccagcgc
gtggtgcggggcacgctgggcctggagatggagggcgcggcgatcggcgacctcgcgggc
cgctgccagaagcggtcgatcttcgtgaaggcggtgagcgatcacgccgacctcgccaag
gacgacggcttccgcgcgttcgcgtgccgcgcctcggcggcggtgctggtcgcgttcctg
cagaagcacctcgagccggcgccgcggccggagcgcgagctgccggggcggcgcgggccg
gccggagaggtggattgcacctcgggggacggcgagcgcggcgagcgcgcgttcgaggag
cggcacgacggcttcctccagcgcatcgagcgcgtggcgctgctgcgcacgcccggcgcg
accgtcacgaggcaccggacgcagccgccgttcgcgggcgtgctcgaggtggcggcgcgg
gacggatcgctcgtcgatctgcgggtgatcggcgcgctcgatcagtcgatcacggaggag
ctcgtcgcgcgctacgtgaccgaggtggagcgcccgttccgggagcaggatccgctgctc
cgatcgacgctgatccacgcgggcccgcaggcgccgccagcgctgatcgagcgcgcatgg
cgccgcggcgtcgtgctcaagagcttctcggagtaccaggggctcatcgacttcggccgg
tacctcgtgcggcagacggaccggctcgaggcggacccgatctacccgccgtggctctac
gtcgagcagccggccgtggtgagcctcggcgaccgcgagaagagcgccacggagagcgcg
ctcgcgtcgctgtgggagctgctcgacgcgccccgccggcgcttcgtgctggtgctcggc
gacttcggcgcgggcaagacgttcctcttgcacgagctcgcgcggaggatggtgagggag
gggcacccgctcgtgccggtgctcatcgagatgagccggctcgagaagcagcgctcgctg
aacgtgctcgtggcgcagcacttcgcgctcgcggacgagccgatcgacccgcgcgccttc
ggctacatgctggccgaggggcggatcgcgctgctcttcgacggcttcgacgagctcgcc
ctgcgcctgacgtacgaccgggcgctcgagcacttcgagaccgtgatgcaggcggccgag
gggatcgcgaaggtcgtggtgaccagccggacgcagcacttcctcgatgaccggcagatc
gagcaggagctcgcccggcgggcggagcaggtgcagggctaccggctcgtgcagctggag
gggttcggggagccgcagatccggcggttcctgggcaacctgatccccgagcccgcggag
gccgaggcccggtaccggctgctccacgaggtcagcgatctgctcgggctctcggagaac
ccgcgcatgctcgggttcatcgcgaagatcgaggagagaaagctcctcgaagccaaggag
gggacgggggagatcaccacggccaagctgtacgagctgctcgtggagcagtggctcgac
cacgagcaccggcgtgccaacccgcggggagcgccgcgcggcatctcgcgcgaggcgctc
cggggcgcgatgaccgagctcgcgcggctgctgtgggaccggcgggcgcgcgcggtcggg
atcgccgagctgccggagagcctcgtgaagggcgtgcagccgaaggacgggccgccgctg
gagcgggcgatggtcgagttcctgatcggctcgggatcgctgctcgtgcgggacgcggag
ggggccttctcgttcgtccaccgctcggtcctggagtggctcgtggccgaggcggcggcg
cgggaggtgaaggacacaggggacagcgcggcgctcgcggccgacgagatgagcgagctg
atggtggacttcttcgtgtcgctcgcggggcgcgagcaggcggcggcgtgggcggcgcgg
gtgctgcacggggcggccaaggggcacgcgaaggacaacgggctgcggatcgtgcgcttg
ctggagaagagcgagcagggggcagcggtcgtcggggaggacgagatcgaggtggtcgag
ggcgtgaacctggccggccaggacctgagcgggcagaacctcaaccgcgcggatcttcga
agcgccaatctggcgagagccaacctcacgaacgccgcgctggtcgaggccaggctggcc
ggcgcctcgctcctctcggcgcggcttgggcgggcggatctgcgcaacgcttcgctgatg
ggcgccgatctccggggcgcggacctgtcgtttgctcgcctcgtggacgcggatttgacc
ggcgccgatctcgccggggcgacgctgcggggcgccaagctggtcggcgcccggggggtg
gccgtcgcgtcgctcgtggcggaaggggcggcgccacctcggccttccggggccgacctg
atgtggataccggcgtcatcgtgcaatgcggtggcctggaatccctcgggagatctcctc
gcgacgggccatggcgacggctcggtccggctctgggatgtggtctccgggcgagccatt
cgggggatagctggacacctcggtccggtgaacagcgtggcgttcagccctgatggccgg
acgctggcctcagggtcggatgactcgagcgtgatgttgtggaaggtcgagagcgggcga
gtcctccgcgtcttcgatggccatggcgtcggggtgaggagcgtcgtgttcagccctgac
ggccggacgctggcctcgggggcggggcgcgcaatgcgcctgtggaaggtcgagagcggg
cacgtcctccgcgtcttcgagggtcatggcaactgggtgaacagcgtcgtgttcagccct
gatggccggacgcttgcttcggcgtcggatgacatgaccgtgaggttgtgggaggtcgag
agcgggcgagccctccgtgtcttcgagggccatggcctgatggtgacgagcgtggcgttc
aggcctgatggccggacgctcgcttcggggtcgcgtgacatgaccgtgaggttgtgggag
gtcgagagcgggcaggtcctccgcgtcatcgagggccatggcgcccgggtgaacagcgtt
gtattcagtcctgacggcctaacgctggcctcggggtcgaatgatacatccgtgaggttg
tgggaggtcgacagcgggcaggtcctccgcgtcttcgagagccacggccatgacgtgatg
agcgtggcgttcagccctgatggccgaacgctggcgctggagccgaatgacacgaccgtg
aggttgtgggaggtcgagagcggtcgagtccttcgcaccttgggcggtcatggcaaggcg
gtgacgagcgtggcgttcagccccggcggccggacgctggcctcggggtcgcatgacacg
aacgtgaggttgtgggaggtcgagagcgggcgagccctccgcgtcctcgagagccacagc
catcacgtgatgagcgtggcgttcagccctgacggccggacgctggcctcggggtcgcat
gacacgaccgtgaggttgtgggaggtcgagagcgggcgagccctcagcaccctgggcggt
catgtcaaggcggtgacgagcgttgtattcagccctgatgggcggatgctggcctcgggg
tcgaatgacacgaccgtgaggctgtgggaggtcgagagcgggcgagccctccgcgtcttc
gagggccatggcaaggcggcgacgagcgtggtgttcagccctgacggccggacgctggcc
tcggggtcgaatgacacgaccgtgaggctgtgggaggtcgagagcggccgagtcctccgc
accttcgggggtcatggcaaggtggtgacgagcgtggtgttcagccccgatggccggacg
ctggcctcggggtcgaatgacacgaccgtgaggttgtgggaggtcgagagcgggcgagcc
ctccttgtcttcgaggaccatggcaagggggcgacgagcgtggcgttcagccctgacggc
cgaacgttggcctcgggttcgtacgatacgatggtgaggttgtgggaggccggaagcggt
cgattcctcggcgctctcaggggccacacggcccctgtggtgagcgtctccttcagcccc
gacggcacgctcctcgcttctgcctcgagcgacggcaccctccgcctctggcgggtcgcc
accggccgatgtctcgcgatcctcctgccctgcgccgagggatgggccgccttcaccccc
gacggtcgttacaggttcggcggcgacatcgctggctccttctggcacgtaatcggcctc
tgccgcttcgagcccggggagctcgaaccctacctgccgagccccctccgcctccccgac
ggcgagcccctcatcgcgctcccgcccgccggaacgccgcccgggagcggcatggcatag
DBGET
integrated database retrieval system
