Sorangium cellulosum So ce56: sce8540
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Entry
sce8540 CDS
T00634
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl02024
Quorum sensing
scl03060
Protein export
scl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
sce8540 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
sce8540 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sce8540 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scl02044
]
sce8540 (ffh)
Enzymes [BR:
scl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
sce8540 (ffh)
Secretion system [BR:
scl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
sce8540 (ffh)
Eukaryotic Sec-SRP protein
sce8540 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Sporozoite_P67
AAA_22
AAA_31
ATP_bind_1
6PF2K
Lamprin
AAA_30
Thymidylate_kin
AAA_33
NPHP3_N
Zeta_toxin
APS_kinase
AAA_16
ResIII
cobW
nSTAND3
CLP1_P
AAA_17
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
CAN98710
UniProt:
A9FZ48
LinkDB
All DBs
Position
11899814..11901454
Genome browser
AA seq
546 aa
AA seq
DB search
MFDTLTRGFRQARNRLAGLTELTAGNIDAALREVRLSLLEADVEIGVVKAFLARVKEAAV
GRTLETRVKHAGEVHQVSASDHFIKICHDELEAMMTHEGDEIAWADSGPTGIMMVGLQGS
GKTTSCAKLSRYLEKQGKKPLLVAADMQRPAAVEQLKVLGESLKIPVFNIPGESPVAICA
AARGEAKRLGRDVIIYDTAGRLAIDEPLMQELAQIKDATKPENVFLVVDAMIGQDAVKTA
RGFNERLSIGGVVLTKLDGDARGGAALSIKEVTGAPVLFTGIGETTDKFEPFRADGMASR
ILGMGDVVGLMQDFEEVVDQKKAEKDAARMLQGDFTLEDFLDQVRMIQKMGSLKDLVDKL
PLGGMFPGGLPQDVNLDDRELVRIEAIIQSMTRLEKSDPYALVREPKRVERIAKGSGSKP
EAVSELVQKFLFMRQMMSGLGQNMGLMGKIPGMKQMAMAKNMREMQKQMMAGGGLPGVGM
PGMGFPGMGFPGMGMPGLGMPGMGGFPGAGAGGPNMTKMKTLSASERNAKKAQRKRERDA
RKKGRK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgctgacacggggctttcgtcaggccagaaaccgcctcgccgggctcacg
gagctcaccgcgggcaacatcgacgccgcgctccgcgaggtaaggctcagcctgctcgag
gccgacgtcgagatcggggtggtcaaggcgttccttgcccgggtcaaggaggccgcggtc
ggccgcaccctggagacgcgcgtgaagcacgccggcgaggtccaccaggtctcggcgagc
gaccacttcatcaagatctgccacgacgagctcgaggcgatgatgacccacgagggcgac
gagatcgcctgggccgacagcgggcccacgggcatcatgatggtcggcctccagggctcc
gggaagacgacgagctgcgcgaagctctcgcgctacctcgagaagcaggggaagaagccg
ctgctcgtcgcggccgacatgcagcgccccgcggccgtcgagcagctcaaggtcctcggc
gagtcgctcaagatccccgtgttcaacatcccgggcgagtcgccggtcgccatctgcgcc
gcggcccgcggcgaggcgaagcggctcggccgtgacgtcatcatctacgacaccgccggc
cgcctcgcgatcgacgagccgctcatgcaggagctcgcgcagatcaaggacgcgaccaag
ccggagaacgtcttcctcgtggtcgacgcgatgatcggccaggacgccgtgaagacggcg
cgcggcttcaacgagcggctgtcgatcggcggcgtcgtgctgacgaagctcgacggcgac
gcccgcggcggcgcggcgctcagcatcaaggaggtgacgggcgcgcccgtcctcttcacc
ggcatcggcgagacgacggacaagttcgagccgttccgcgccgacggcatggcgagccgc
atcctcggcatgggcgacgtcgtcggcctcatgcaggacttcgaggaggtcgtcgaccag
aagaaggccgagaaggacgccgcgcggatgctccagggcgacttcacgctcgaggacttc
ctcgatcaggtgcggatgatccagaagatgggatcgctgaaggatctcgtcgacaagctg
cccctcggcggcatgttcccgggcggcctgccccaggacgtgaacctcgacgaccgggag
ctcgtccgcatcgaggcgatcatccagtcgatgacccgcctcgagaagagcgacccgtac
gcgctggtccgcgagccgaagcgggtggagcgcatcgcgaagggctcgggctcgaagccc
gaggcggtgagcgagctcgtccagaagttcctgttcatgcgccagatgatgagcggcctc
ggccagaacatgggcctcatgggcaagatccccggcatgaagcagatggccatggccaag
aacatgcgggagatgcagaagcagatgatggccggcggcggcctgcccggggtggggatg
ccgggcatgggctttccgggcatgggcttcccggggatggggatgcccgggctggggatg
ccgggcatgggcggcttcccgggcgccggcgccgggggcccgaacatgacgaagatgaag
acgctcagcgcctccgagcgcaacgcgaagaaggcgcagcgcaagcgcgagcgcgacgcc
cgcaagaaggggcgcaagtag
DBGET
integrated database retrieval system
