Sorangium cellulosum So ce56: sce8671
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Entry
sce8671 CDS
T00634
Symbol
polA1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03030
DNA replication
scl03410
Base excision repair
scl03420
Nucleotide excision repair
scl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sce8671 (polA1)
03410 Base excision repair
sce8671 (polA1)
03420 Nucleotide excision repair
sce8671 (polA1)
03440 Homologous recombination
sce8671 (polA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scl03032
]
sce8671 (polA1)
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce8671 (polA1)
Enzymes [BR:
scl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sce8671 (polA1)
DNA replication proteins [BR:
scl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
sce8671 (polA1)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
sce8671 (polA1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
sce8671 (polA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAN98841
UniProt:
A9G0B1
LinkDB
All DBs
Position
12101976..12104678
Genome browser
AA seq
900 aa
AA seq
DB search
MSTRPTALPPAGAPDVLYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDE
RKPAYLGVAMDSPGKTFRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGL
EADDLVAVAVARAKERGLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGV
PPEQVRDLLALVGDTSDNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVKKPRIRESLQ
QNEADARLSQKLVTLDGGAPVSLDLETLRYGGADTGRLRELFTELGFSRFLKAVRAPEPT
ARAATYRVLTTREELEGFARSARAAGRLALDVLATSREPMSAHVCGVALACEPGQAVYVP
LGHRYLGAPAQLSMSDIDAVMGPLLADPELPKVGHDVKFCEVILLRHRIGLVGVSFDTML
ASYLLDPEGKNQLHELAERELGAKMQTLDEVAPKRRGQAQRALDEIELGEASSYGAAFAD
VALSLTDRLRPRLRAEKLEDLLVQIELPLSAVLAEMELTGVLVDPQALAQLGAQMTTELA
ALEQKAREIVGHDINLASPKQLEAVLFDELKLRSQRKTKTGRSTDADVLEALSEEHPFPG
VVLEHRAIAKLKGTYVDALPRLVHPGTGRIHTRWGQAVAATGRLSSQDPNLQNIPIRTEL
GRMIRRAFVAPPGSVIVSADYSQIELRVLAHLSKDPVLVDAFRTGQDVHVRTAMEIFGVD
QAGVTAEMRRRSKTINFGVIYGMGESALAKRLDISRAEAARFIDAYFARYRGVHEFMEGT
MAEAKRSESVRTLLGRRRLLPDLRSSDRMRRAQAERIAQNTPIQGTAADLLKLAMVRVPR
PVVPGARMVLTVHDELAFEVPAEAVDEAKAKVREAMESVFPLDVPLVVDVGHGPTWADAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcgccctaccgcgcttcccccggccggagctccggacgtcctctacctcgtc
gacctgtcgggctacgtcttccgcgcctaccacgcgatcagcccgctctcgagcccgagc
ggcgagccgacccacgcgacgtacggcaccgtcgcgatgctcacgaagctcgtggacgag
cggaagcccgcgtacctgggcgtggcgatggactccccgggcaagacgttccgcgacgag
ctcgacccccgctacaaggcgcaccggccgccgccgccgcccgatctcggggtgcagatg
agccggtgccgggagatcgtcgaggcgtaccgcatcccgatcttcatccaggaggggctc
gaggcggacgatctcgtcgccgtcgccgtcgcgcgggccaaggagcgggggctgcgcgtc
gtcatcgcgtcgagcgacaaggatctgatgcagctcgtcgacggcgagcaggtgatgctc
tgggacgcgatgcgcgacaaggtctacgggcaccccgaggtcgtcgcgaagttcggggtg
ccgccggagcaggtgcgcgacctgctcgcgctcgtcggcgacacctcggacaacgtccct
ggcgtccccggcgtgggcctcaagacggccgccgagctgctcgcgcagttcggctcgctc
tcggcgatctacgagcgcatcggcgaggtcaagaagccccgcatccgggagtcgctccag
cagaacgaggccgacgcgcgcctctcgcagaagctcgtgacgctcgacggcggcgcgccc
gtgtcgctcgacctcgagacgctgcgctacggcggcgcggacaccggcaggctccgcgag
ctcttcaccgagctcggcttctcgcgcttcctgaaagcggtccgcgcgcccgagccgacc
gcgcgcgcggcgacctaccgggtcctgacgacgcgcgaggagctcgagggcttcgccagg
tcggcgcgcgcggccggccgcctcgccctcgacgttctcgcgacgagccgcgagccgatg
agcgcccacgtctgcggcgtcgcgctcgcctgcgagccggggcaagccgtgtacgtcccg
ctgggccaccgctacctcggcgcgccggcccagctctcgatgagcgacatcgacgcggtg
atgggcccgctgctcgccgaccccgagctcccgaaggtcggccacgacgtcaagttctgc
gaggtgatcctcctgcggcaccgcatcgggctcgtgggcgtctccttcgacacgatgctg
gcgagctacctgctcgatcccgaggggaagaaccagctccacgagctcgccgagcgcgag
ctcggcgccaagatgcagaccctcgacgaggtggccccgaagcgccgcggtcaggcgcag
cgcgccctcgacgagatcgagctcggcgaggcgtcgagctacggggccgcgttcgccgac
gtcgcgctgtcgctcaccgaccggctgcgccctcggctccgcgccgagaagctcgaggac
ctgctcgtgcagatcgagctgcccctctccgccgtgctcgcggagatggagctcacgggc
gtcctcgtcgacccgcaggcgctcgcgcagctcggtgcgcagatgacgaccgagctcgcc
gcgctggagcagaaggcgcgcgagatcgtggggcacgacatcaacctggcgtcgccgaag
cagctcgaggcggtcctgttcgacgagctcaagctgcgctcccagcgcaagacgaagacc
ggccgctcgaccgacgccgacgtgctcgaggcgctctcggaggagcacccgttccccggg
gtggtcctcgagcaccgcgccatcgccaagctcaagggcacgtacgtcgacgcgctgccg
cgcctcgtgcacccgggcacgggccggatccacacgcgctgggggcaggccgtggccgcg
accgggcggctctcgtcgcaggacccgaacctgcagaacatcccgatccgcacggagctc
ggccggatgatccggcgtgcgttcgtggcgccgcccgggagcgtgatcgtgagcgccgac
tactcccagatcgagctgcgcgtcctcgcgcacctctcgaaggacccggtgctcgtcgac
gccttccgcaccgggcaggacgtgcacgtgcgcacggccatggagatcttcggcgtggac
caggcaggggtcaccgccgagatgcgccgccggagcaagacgatcaacttcggcgtgatc
tacggcatgggcgagtcggcgctcgccaagcggctcgacatctcgcgggcggaggcggcg
cgcttcatcgacgcctacttcgcgcgctaccgcggcgtgcacgagttcatggaggggacg
atggccgaggcgaagcgctccgagtcggtgcggacgctgctcggccggcgccgcttgctc
ccggatctgcgcagcagcgaccgcatgcgccgcgcgcaggcggagcgcatcgcgcagaac
acccccatccaggggacggcggcggatctcctgaagctcgcgatggtgcgcgtcccgcgc
cccgtcgtccccggcgcgcgcatggtgctcacggtgcacgacgagctcgcgttcgaggtg
ccggccgaggccgtggacgaggccaaggcgaaggtgcgcgaggccatggagtcggtcttc
ccgctcgacgtcccgctcgtcgtcgacgtcggccacggccccacctgggccgacgcgcac
tag
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