KEGG   Sorangium cellulosum So ce56: sce_pseudo_05
Entry
sce_pseudo_05     CDS       T00634                                 
Name
(GenBank) pseudogene
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
scl  Sorangium cellulosum So ce56
Pathway
scl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:scl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    sce_pseudo_05
   03460 Fanconi anemia pathway
    sce_pseudo_05
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scl03032]
    sce_pseudo_05
   03400 DNA repair and recombination proteins [BR:scl03400]
    sce_pseudo_05
DNA replication proteins [BR:scl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    sce_pseudo_05
DNA repair and recombination proteins [BR:scl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     sce_pseudo_05
SSDB
Motif
Pfam: ERCC4 Ribosomal_S5_C
Other DBs
NCBI-ProteinID: CAN94224
LinkDB
Position
5663194..5663649
AA seq 151 aa
MKQADTMTIIIDTREQRPWTFGGTHRVERAALPAGDYSLAGFETSVAIERKSLDDFVQSI
TWERDRFLRECDRLRSYELKTILVEAGVPDVWAHRYRSKTAPRAVIASALAIEQDYGIST
TWAGSRDSAEKIAALILSRFHRKRVEVRDAP
NT seq 456 nt   +upstreamnt  +downstreamnt
atgaagcaggcggacacgatgacgatcatcatcgacacgcgcgagcagcgcccgtggacg
ttcggcggaacccaccgcgtcgagcgcgcagcgctgcccgccggcgactactcgctcgcc
ggcttcgagacgagcgtcgcgatcgagaggaagagcctcgacgacttcgtgcagagcatc
acgtgggagcgcgaccgttttctccgtgagtgcgaccggcttcgatcgtacgagctcaag
acgatcttggtggaggccggcgtgcccgatgtctgggcgcatcgctaccgcagcaaaacg
gcgccgcgggcggtgatcgcaagcgcgctcgccatcgagcaggactacggaatcagcaca
acgtgggcaggctcgcgcgactccgccgagaaaatcgccgcgcttattctctcgcgattt
caccggaagcgcgtggaggtgcgggatgcaccctga

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