Spiroplasma clarkii: SCLARK_001060
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Entry
SCLARK_001060 CDS
T05330
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
scla
Spiroplasma clarkii
Pathway
scla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCLARK_001060 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scla01007
]
SCLARK_001060 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scla03016
]
SCLARK_001060 (aspS)
03029 Mitochondrial biogenesis [BR:
scla03029
]
SCLARK_001060 (aspS)
Enzymes [BR:
scla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SCLARK_001060 (aspS)
Amino acid related enzymes [BR:
scla01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SCLARK_001060 (aspS)
Transfer RNA biogenesis [BR:
scla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SCLARK_001060 (aspS)
Prokaryotic type
Other AARSs
SCLARK_001060 (aspS)
Mitochondrial biogenesis [BR:
scla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SCLARK_001060 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
FAM91_C
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ARU91640
UniProt:
A0A1Y0L1J0
LinkDB
All DBs
Position
complement(876407..878134)
Genome browser
AA seq
575 aa
AA seq
DB search
MKRTHTCGELNLKNVGTKVILQGWIAKIRKMGALTFIDLRDRYGITQLVIGEKLSSSLAS
LKPEYVIEVSGLVIERKSKNPDLATGAIEIEVNEIVIINKSELTPFEIKNQIESQEDTRL
TYRYLDLRRPEMQNNLLVRSQMNHSIRNYFIENNFIEIETPVFGKSTPEGARDFLVPSRL
NQGKFYALPQSPQLYKQLFMISGFDRYFQIVKCFRNEDLRIDRQPEFTQLDMEMSFANSE
DVMQTIESLVKKVFLDIKKIKINEPITRLSWADAFDKYGNDKPDLRFGYEIKTLNDLFLK
TTIPLFENINNKVIRAICVTGLLNKKDLEALTETAKQNSVEILPFVKFNNNEWSGSLASK
LSDSEKQSLIEKYNLKEEATILFAVDDYIKASKALGAVRNHIAKLQDLLDPNIFKFAWIT
NFPLFEFSEEENRYVAAHHPFTMPSDECLDNFDTDKENATAKAYDLVLNGFEIGGGSQRI
TDPNIQQRMFDAIELTKEQVEQNFGWFVNAYRYGAPYHSGCALGLDRICMLLTGSENIRE
VIAFPKNSSGIDPMTNAPDAVTLSQLEELNLQIKK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtactcacacttgtggtgaattaaatttaaaaaatgttgggacaaaagttatt
ttacaaggttgaattgcaaaaattcgcaaaatgggagccttgacttttattgatttaagg
gatcgttatggaattactcaactagtaattggtgaaaaacttagttcaagtttagcaagt
ttaaaacctgaatatgttattgaagttagtggacttgtaattgaaagaaaatcaaaaaac
cctgaccttgcaactggtgcaattgaaattgaagtaaatgaaattgttataattaacaag
tctgaattgactccctttgaaattaaaaatcaaatcgagtcacaagaagatactcgttta
acttatcgatatttagacttaagaagaccagagatgcaaaataatttgttggtgcgtagt
caaatgaatcattcaattcgaaattattttattgaaaataattttattgaaattgaaact
ccagtttttgggaaatcaactcctgaaggtgctcgagattttttagtgccatcaagatta
aaccaaggtaagttttatgccttaccacaatctccacaattatataaacaattgtttatg
atctcaggatttgatagatactttcaaattgtaaaatgttttcgaaatgaagacttaaga
attgaccgtcaaccagaatttactcaacttgatatggaaatgagttttgcaaatagtgaa
gatgttatgcaaacaattgaaagtctagttaaaaaagttttcttagacattaaaaaaatt
aaaatcaacgaaccaatcaccaggttgtcatgagctgatgcttttgataagtatggcaat
gataaaccagatctgagatttggttatgaaatcaaaactttaaatgatttatttttaaaa
acaacaataccattgtttgaaaatattaataataaagtaattagagcaatttgtgttact
ggtttattaaataaaaaagatttagaagcattaactgaaactgccaaacaaaattctgtt
gaaatattaccatttgttaaatttaataacaatgaatgaagtgggagtttagcatcaaaa
ctatctgacagtgaaaaacaaagtttaattgaaaaatataatttaaaagaagaggctaca
attttatttgcagttgatgattatataaaagcatcaaaagccttgggagcagttcgtaac
catattgcaaaactacaagatcttttagatccaaatatttttaaatttgcctgaattaca
aatttccctttgtttgaattttcagaagaagaaaatcgttatgttgcagcacatcatcct
tttacaatgcctagtgatgagtgtcttgacaattttgatactgataaagaaaatgcaacc
gccaaagcttatgacctagttttaaatggttttgaaattggaggaggtagtcaaagaatt
acagatccaaatattcaacaaagaatgtttgacgcaattgaattaacaaaagaacaagtt
gaacagaactttggttgatttgttaatgcttatcgttatggtgcaccttaccattcaggt
tgtgctcttggtcttgacagaatctgtatgttattaactgggagtgaaaatattcgagaa
gtcattgcttttccaaaaaactcatctggaattgatccaatgacaaatgctccagatgca
gtaactctaagtcaacttgaggaattaaatttacaaataaaaaaatag
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