Spiroplasma clarkii: SCLARK_001412
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Entry
SCLARK_001412 CDS
T05330
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
scla
Spiroplasma clarkii
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scla03021
]
SCLARK_001412 (nusA)
03009 Ribosome biogenesis [BR:
scla03009
]
SCLARK_001412 (nusA)
Transcription machinery [BR:
scla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SCLARK_001412 (nusA)
Ribosome biogenesis [BR:
scla03009
]
Prokaryotic type
rRNA transcription factors
SCLARK_001412 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
ACT_9
KH_2
Motif
Other DBs
NCBI-ProteinID:
ARU91937
LinkDB
All DBs
Position
complement(1147914..1149296)
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AA seq
460 aa
AA seq
DB search
MTVIIRRTLGHDWWCKVIRSNLWYHWREKIDKKIVIEGIKEGFQKAYEKYFDPEAIVKVE
IDGNTGQIKVFKELTVVQKIEDEWLDITLSDAQAKYGADVTIGDYVYEPVEFGSEFSKLA
VLQVGQIIKQKIREGEKIKIYEEFLEKNHEIIAGIIKDVTLTSYLVEVNGSIISIWNKKM
IPGEEFEDGDRICFYVEDVVRDSKHSQVQASRIHPDFLAKLMELHVPEIAEGIVEVKSVS
RDPGNRSKIAVFSHDENIDPIGACIGTAGARIKEVSKELHGERIDIILWNEDKKTFIMNA
LAPVKVISIDLDETENECFVIVPNEQLSLAIGKKGMAARLVANLVNVKINIVSISESGSR
NIENLWNGNITKEQLESSEFINNTNSRKQKSKFNNFENKSKPAQPVVEEVHDEIDEKLYV
EEASVDEIQSYADAFEDLANDEPEDLTVEINDDYDSYYED
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgacagtaattattaggaggacattaggccatgattgatggtgcaaagttattagaagc
aatttatgatatcactgaagagaaaaaattgataagaaaattgtcatagaaggtattaag
gaaggttttcaaaaagcctatgaaaagtattttgatccagaagcaattgttaaagttgaa
attgatggaaatactggtcaaatcaaggtttttaaagaactaacagtagtacaaaaaatt
gaagatgagtgattagacattaccttaagtgatgctcaagcaaaatatggagcagatgta
acaatcggtgattatgtttatgaaccagttgaatttggatctgaattttcaaaattagca
gttttacaagttggacaaattatcaaacaaaaaattcgtgaaggtgaaaaaataaaaatc
tatgaagaatttttagaaaaaaaccatgaaattattgctggaattatcaaagatgtaact
ttaacaagttacttagttgaagtaaatggttcaataatttcaatttgaaataaaaaaatg
attcctggtgaagaatttgaagatggtgacagaatttgtttttatgtagaagatgttgtt
cgtgacagcaagcattcgcaagtccaagcttctagaatccaccctgattttttagcaaaa
ctaatggaattacatgttccagaaattgcagaagggattgtagaagttaaatcagtttct
cgagacccaggaaacagatcgaaaattgcagtgttttctcatgatgaaaatattgaccca
attggggcttgtattggaactgcaggagcaagaatcaaagaggtcagcaaagaattacat
ggtgaaagaattgacatcattctttgaaatgaggacaaaaagacattcattatgaatgcc
ttggcaccagtaaaagtcattagtattgacttggacgaaacagaaaatgaatgttttgtt
attgtgccaaatgaacaattatcattagcaattggaaaaaaaggtatggctgcacgtttg
gttgctaacctagttaatgttaaaataaatatagtttcgattagcgaatcaggttcaaga
aacattgagaacttgtgaaatggaaacataaccaaagaacaattggaaagttctgaattt
atcaacaacacaaactcgcgtaaacaaaagagtaaatttaacaactttgagaataaaagt
aaaccagctcaaccagttgtagaagaagttcatgatgaaattgatgaaaaattatatgtt
gaagaggcttcggttgatgaaattcaatcgtatgcagatgcctttgaagacttagcaaat
gatgaacctgaagatttaacagtcgaaatcaatgatgattatgattcatactatgaagat
tag
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