Spiroplasma clarkii: SCLARK_001515
Help
Entry
SCLARK_001515 CDS
T05330
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
scla
Spiroplasma clarkii
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scla03032
]
SCLARK_001515 (hupB)
03036 Chromosome and associated proteins [BR:
scla03036
]
SCLARK_001515 (hupB)
03400 DNA repair and recombination proteins [BR:
scla03400
]
SCLARK_001515 (hupB)
DNA replication proteins [BR:
scla03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCLARK_001515 (hupB)
Chromosome and associated proteins [BR:
scla03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCLARK_001515 (hupB)
DNA repair and recombination proteins [BR:
scla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCLARK_001515 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
BBS7_pf
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ARU92028
LinkDB
All DBs
Position
complement(1238320..1238643)
Genome browser
AA seq
107 aa
AA seq
DB search
MIYLKTLRWYRRGVINHDKKDLADKLAIKGDFSKTDAESYVNFLFDEITGCLVANEEVSI
AGFGKFVAAPRAAREGINPKTKEKIQIAATTVAKFKPAKQLKEAVAK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttaaaaacgctgaggtggtatagacgaggggtaattaaccatgacaaaaaa
gatctagcagataaattagctattaaaggtgatttttcaaaaacagatgctgaatcatac
gtaaacttcctttttgatgaaatcacaggatgtttagttgcaaacgaagaagtttcaatt
gcaggatttggtaaatttgtggcagcaccaagagcagcacgtgaaggaattaatcctaaa
acaaaagaaaaaattcaaatagcagcaactactgttgcaaaattcaaaccagctaaacaa
ttaaaagaagctgttgctaaatag
DBGET
integrated database retrieval system
