Spiroplasma clarkii: SCLARK_001576
Help
Entry
SCLARK_001576 CDS
T05330
Symbol
ytjP
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
scla
Spiroplasma clarkii
Pathway
scla01100
Metabolic pathways
scla01120
Microbial metabolism in diverse environments
scla01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCLARK_001576 (ytjP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scla01002
]
SCLARK_001576 (ytjP)
Enzymes [BR:
scla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SCLARK_001576 (ytjP)
Peptidases and inhibitors [BR:
scla01002
]
Metallo peptidases
Family M20
SCLARK_001576 (ytjP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
SIC1_C
Motif
Other DBs
NCBI-ProteinID:
ARU92076
LinkDB
All DBs
Position
complement(1276688..1277995)
Genome browser
AA seq
435 aa
AA seq
DB search
MEKTKELVKIPSFRKDPKKGEAVPQAIQAALTYCVNLCQEFGMKTFIAPDFMYGYADYGT
GDKLFGIICHLDVVPPGNLDEWKTKPFEPVEIDGKLYGRGSFDDKGPTLMNLYAFKYLID
NGFKPDYTIRFIFGTSEETTWECMEAYKKHEKLCDLGYVPDGHFPVVYAEKWISDVDLVG
KFTSEFEITGGEVYNAVNDLVKYKGPKVEEIKKFLDQNKIEQYMKDNDLYVKGVSAHGSL
PFKGVNAANWLLTAINSVGLKHPLAEFVSKHVNADFEMKSVFGDLKDETGNLTANNGIIK
ITPTDFRYTFNFRVPCTRDPKVDVNAVLTKACQPFGINVEVQDIEDSVYFDKNGDVVKNI
MLVYQEVTGDLTSEPIAIGGGTFAKSMPNMIAFGAEFDLNDSTMHAYNEYVKIEDLKKMM
EIYAKSIVKLTTIKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaacaaaagagctagttaaaataccttctttcagaaaagaccctaaaaaaggt
gaagcagttccccaagcaattcaagctgcactaacatattgtgttaatttgtgtcaagaa
tttggaatgaaaacttttattgctcctgattttatgtatggttatgccgattacgggact
ggtgacaaattatttggtatcatctgtcacttagatgtagttccaccaggaaatttagat
gagtgaaaaactaaaccttttgaaccagttgagattgatggaaagttatatggaagagga
tcatttgatgacaaaggtccaaccctaatgaacttatatgcttttaaatacctaattgac
aatggtttcaaaccagattacacaattagatttatttttggaacaagtgaggaaactact
tgagaatgtatggaagcatacaaaaaacatgaaaaactatgcgatttaggttatgtacct
gatggtcatttcccagtagtttatgctgaaaaatgaattagtgatgtagatttagttggt
aaattcaccagtgagtttgaaattactggcggggaagtttacaatgctgttaatgactta
gtgaaatataaaggtccaaaagtagaagagattaaaaagttcttagatcaaaacaaaatt
gagcaatatatgaaagataatgacttatatgttaaaggtgtctcggctcatggtagctta
ccatttaaaggggtaaatgcagccaactgattgttgacagcaattaatagtgttggttta
aaacatcccctagcagagtttgtaagcaaacatgttaatgctgattttgagatgaaaagt
gtctttggagatttgaaagatgagacaggaaacttaacagcaaataacggtataataaaa
ataactcccacagattttcgttatacatttaattttagagtaccatgtactcgtgaccca
aaagttgatgtaaatgctgttttgacaaaagcttgtcagccatttggcattaatgtggaa
gttcaagatattgaagatagtgtctactttgacaaaaatggtgatgtagttaaaaatata
atgttagtttaccaagaagtaactggggatttaactagtgagccaattgcaattggaggt
ggtacttttgcaaaatcaatgccaaatatgattgcctttggagctgaatttgacttaaat
gattcaacaatgcatgcttataatgagtatgttaaaattgaggatttgaaaaaaatgatg
gaaatttatgcaaagtcaattgttaaattaaccactatcaagaaatag
DBGET
integrated database retrieval system
