Spiroplasma clarkii: SCLARK_00362
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Entry
SCLARK_00362 CDS
T05330
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scla
Spiroplasma clarkii
Pathway
scla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCLARK_00362 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scla03021
]
SCLARK_00362 (rpoA)
03400 DNA repair and recombination proteins [BR:
scla03400
]
SCLARK_00362 (rpoA)
Enzymes [BR:
scla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCLARK_00362 (rpoA)
Transcription machinery [BR:
scla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCLARK_00362 (rpoA)
DNA repair and recombination proteins [BR:
scla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCLARK_00362 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
AF1548-like_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARU91104
UniProt:
A0A1Y0KZC5
LinkDB
All DBs
Position
303746..304699
Genome browser
AA seq
317 aa
AA seq
DB search
MRQFARPEFTLLKEEKEKNYGEFKVEPLERGFGTTLGNAIRRTLLSSTPGAAVYAIKITG
AAHEFTSIDGIIENVSRIILNIKKLALRIDHNMFDDEEVVELALNSSTVGPVTAGEIELP
AGVEVVNKDLVICNLADGGNLELTLFAKNSRGYRSFKDNKKEKLTADSITIDSNYSPIVQ
VAYEVEATKIGKSVDLEKLTIKIETDGTIAPSDAIATASKILVEHLQFFVNLNEEINDLG
VIGVTSEEDEKELDRSIEDLDFTQRSLNCLKRANINTLRDLVSRSEDDIQEIRNLGRKSL
KEIKDKVVQLGLTFKQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattcgcaagacctgaatttacattattaaaagaagaaaaagaaaaaaattat
ggggaatttaaagttgaacctttagaaagagggttcggtactacacttggtaatgcaatt
agaagaactttattaagttcaacaccaggtgcagcagtttatgcaataaaaatcactgga
gcagcacatgaatttacttcaatcgatggaattattgaaaatgttagcagaattatttta
aatattaaaaaattagcgctaagaattgatcacaatatgttcgatgatgaagaagttgtt
gaattagcactaaattcatcaactgttggtcctgtaactgctggagaaattgaattacct
gcaggagtagaagttgttaataaagatctagttatttgtaatttagcagatggtggaaat
ttagaattaactttatttgcaaaaaattctagaggttatagatcttttaaagacaacaaa
aaagaaaaactaacagctgattcaattacaattgattcaaattattcaccaatagtacaa
gtagcttatgaagttgaagccactaaaattggtaagtcagtcgatcttgaaaaactaaca
attaaaattgaaacagatgggacaattgcaccaagtgatgcaattgctactgcttcaaaa
attctagtagaacatttacaattctttgttaacttaaatgaagaaatcaatgatcttgga
gtaattggagttacaagtgaagaagatgaaaaagaattagacagatcaattgaagattta
gacttcacacaaagaagtttaaactgtttgaaaagagcaaacatcaatactctacgagat
ttagtatcacgtagtgaagatgatatccaagaaattagaaacttgggtagaaaatcatta
aaagaaatcaaagataaagtagttcaattgggacttacttttaaacaagactag
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