Spiroplasma clarkii: SCLARK_00484
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Entry
SCLARK_00484 CDS
T05330
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scla
Spiroplasma clarkii
Pathway
scla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCLARK_00484 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scla03400
]
SCLARK_00484 (mutM)
Enzymes [BR:
scla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCLARK_00484 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCLARK_00484 (mutM)
DNA repair and recombination proteins [BR:
scla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCLARK_00484 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
AsnC_trans_reg_3
C1_2
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ARU91188
UniProt:
A0A1Y0L0F0
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All DBs
Position
400525..401352
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AA seq
275 aa
AA seq
DB search
MPELPEVETVVRILRTKILGEQILDVKVYLNKFIKGNIDIPEFRKDIVGRTIAGIERIGK
NIIFELQDKVLISHLRMTGKWFVFNKANFFESPHHLAVFTLSHDKILAFHDVRKFGTFHY
QDQETYKTIDPINKVALEPLDSKVNGEYLQAKMQKSARHIKTLLLDQTLVAGIGNIYADE
ILFASKINPLKLGNQLDLSEYTQIAQNATLILKKAIEYGGTTINSYQSEQGVDGRFQREL
QVHTRAGQNCYLCGSKIVKIKVNGRGTYYCPKCQF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaactgttgtcagaattttaagaactaaaattcttggg
gaacagattcttgatgttaaagtttatctaaacaaatttatcaagggaaatattgatatt
cctgaattcagaaaagatattgtaggtagaaccattgctgggattgaaagaattgggaaa
aacattatttttgaactacaagataaagttttaatcagccatttgagaatgacaggcaag
tgatttgtttttaacaaagcaaacttttttgaatctccacatcatttggcagtatttact
ttaagtcatgataaaatcttagcttttcatgatgtcagaaaatttggtactttccattac
caagatcaagagacttataaaactattgatccaattaataaagtagccttagaacctttg
gactcaaaggtaaatggggaatatttacaagcaaaaatgcaaaaatctgcaagacacatt
aaaaccctactgctagatcaaactttagtagcaggaattggtaatatttatgctgatgaa
attttatttgcttctaaaataaaccctttaaagttaggtaatcaacttgacttgagtgag
tacactcaaatagctcagaatgccactttaatcttgaaaaaagcaattgaatatggaggc
acaaccattaattcctaccaatctgaacaaggagttgatggacgttttcaaagagaatta
caagtccacactagagcaggtcaaaattgttatttatgtggaagtaaaattgtcaaaatt
aaggttaatggtcgaggaacatattattgtccaaaatgtcagttttaa
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