KEGG   Spiroplasma clarkii: SCLARK_00568
Entry
SCLARK_00568      CDS       T05330                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
scla  Spiroplasma clarkii
Brite
KEGG Orthology (KO) [BR:scla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCLARK_00568 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scla03019]
    SCLARK_00568 (rnc)
   03009 Ribosome biogenesis [BR:scla03009]
    SCLARK_00568 (rnc)
   03036 Chromosome and associated proteins [BR:scla03036]
    SCLARK_00568 (rnc)
Enzymes [BR:scla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SCLARK_00568 (rnc)
Messenger RNA biogenesis [BR:scla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCLARK_00568 (rnc)
Ribosome biogenesis [BR:scla03009]
 Eukaryotic type
  90S particles
   RNase
    SCLARK_00568 (rnc)
 Prokaryotic type
  rRNA processing factors
   SCLARK_00568 (rnc)
Chromosome and associated proteins [BR:scla03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SCLARK_00568 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3
Other DBs
NCBI-ProteinID: ARU91250
LinkDB
Position
468331..468924
AA seq 197 aa
MPSIVDFLSKFGITPKEPEIYYEALTHNSYSNEKRLSKNYQRLEFLGDAILQQKVSEFIY
LRFPNSDEGILTKYRSSVVRGETLAKFSRLTGLGAYIRLGHGEWESKGYEKDSILADVYE
SLTAAIYLDAGNESLDKWLSQTIFDEKNIDIFLDAMRDYKSELQELIQLEMRNELKYVTV
SQEKQEKTKSYLQSIVC
NT seq 594 nt   +upstreamnt  +downstreamnt
atgccctcaattgttgactttttatcaaaatttggtatcacaccaaaagaaccagaaatt
tattatgaagccttaactcataattcttattcaaatgaaaaaagactctcaaaaaactac
caaagattagagtttttgggagatgcaattttacaacaaaaggttagtgaatttatttat
ttacgttttccaaattctgatgaaggtattttaacaaaataccgtagttcagttgttaga
ggagaaactttagcaaaattttcaagattgacaggtttaggagcatatattcgcctaggt
catggtgagtgagaatcaaaaggttatgaaaaagactcaattttagctgatgtttatgag
tctttaactgctgcaatttacttggatgcaggtaatgaatcacttgataaatgattaagt
caaactatttttgatgaaaaaaacatagacatttttttagatgcaatgcgtgattataag
tctgagttacaagaactcattcagttagaaatgagaaatgaacttaagtatgtgacagtt
tctcaagaaaaacaagaaaaaacaaaatcttatttacagtcaattgtatgttag

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