Spiroplasma clarkii: SCLARK_00729
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Entry
SCLARK_00729 CDS
T05330
Symbol
rbsB
Name
(GenBank) periplasmic sugar-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
scla
Spiroplasma clarkii
Pathway
scla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCLARK_00729 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SCLARK_00729 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scla02000
]
SCLARK_00729 (rbsB)
Transporters [BR:
scla02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SCLARK_00729 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ARU91378
UniProt:
A0A1Y0L0Y3
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All DBs
Position
602897..603865
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AA seq
322 aa
AA seq
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MKKLIMSLMGASILTSTAASVVACGSGGKTIGIVLSTTANPYFSKMKDVATDYLKDKEYS
PVFYDSNDNTATEKTNIENGITKGHLGMIVNPNNAEAATNADPIISAKIPLVTVDREFDG
KKGAASFVTDNTLEAKKLFDNIKAKISPAAGDKLDVYVLRGVSGADASNKRYKGFVTDNL
SEINLLGTSENNFANWERNTAADKVATDITTVNQANVIFAENDEMAMGAYQALNTATNKD
WFKTGYIIGFDGNDDTKASIAKWTEEAKENVFSTIEQDPEKMIKLAIDKMIELIEAEGEA
ATTYASITPVDGKLISGFPSAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattatgtctttgatgggagcatcaattttaactagtactgcagcaagc
gttgttgcttgtggttctggaggaaaaacaattggaattgttttatccacaacagcaaat
ccatatttttcaaaaatgaaagatgtggcaacagattatttaaaagataaagaatattca
ccagtattttatgattcaaatgataatactgccacagaaaaaacaaatattgaaaatgga
attactaaaggacacctaggaatgatagtaaacccaaataatgctgaagcagctactaat
gctgatccaattattagtgcaaaaattccattagtaactgttgacagagagtttgatggt
aaaaaaggagcagcttcatttgtgacagataataccctagaagcaaaaaaactatttgat
aatattaaagcaaaaatcagtcctgcagcaggagataaacttgatgtttatgttcttaga
ggagtttcaggtgctgatgcatcaaacaaaagatacaaaggttttgttacagataattta
tctgaaattaatttgcttggaacatctgaaaataactttgcaaactgagaaagaaataca
gcagcagataaagttgcaactgatattacaacagtaaatcaagcaaatgtaatttttgct
gaaaacgatgaaatggcaatgggagcatatcaagctctaaacacagccactaataaagat
tgatttaaaactggatacattattggttttgatggaaatgatgatacaaaagcatcaatt
gctaaatgaacagaagaagctaaagaaaatgttttttcaacaattgaacaagatcctgaa
aaaatgattaaattggcaatagataaaatgatagaattaatagaagcagaaggggaggca
gcaacaacttatgctagtataacaccagttgatggtaaattaatttctggttttcctagt
gcaagttaa
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