Streptomyces clavuligerus: BB341_01985
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Entry
BB341_01985 CDS
T04717
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB341_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclf03000
]
BB341_01985
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_01985
Enzymes [BR:
sclf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BB341_01985
Transcription factors [BR:
sclf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BB341_01985
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB341_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ANW17080
LinkDB
All DBs
Position
complement(520115..521590)
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AA seq
491 aa
AA seq
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MTTVEDSRYEAVRSRDARFDGVFFFAVATTGIYCRPSCPALTPKRVNVSFYRTAAAAQSA
GYRACRRCRPDAVPGSPEWNTRADVVGRAMRLIGDGIVDREGVSGLAGRLGYSPRQVQRQ
LNAEVGAGPIALARAQRGHTARVLLQTTDLQAAEIAFAAGFASVRQFNDTMRAIYAATPT
ELRAARPARPGRTARFGPVPDGYGTAGVPLRLAHRSPCATEDVFDHLALHALAGIEEVTG
VRGARVHRRTLRLPGGPAVVEVGERPGGQGWLECRLHLTDLRDLTAATQRVRRLFDLDAD
PGAVAERLGADPALAPLVAARPGLRVPGSADPEETAVRMLLARRLTPAAARRRGEVLVAA
LGQPLCRAAGGLTHLFPTAAALAEAPLDGLGLPEERRAALRTLAGALADGSVRLDPGADR
AEAARRLLALPGIGARTAARIRTHALGDPDVPLLQDPEVRAGLRRAGADPAAAERWRPWS
SYAMRYLRTAP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtcgaggacagcaggtacgaggcggtacgcagccgggacgcccggttcgac
ggggtgttcttcttcgccgtcgcgacgaccgggatctactgccgtccgagctgccccgcg
ctcacccccaaacgcgtgaacgtcagcttctaccgcacggccgccgccgcccagagcgcc
gggtaccgggcctgccgccgctgccgccccgacgccgtgcccggctcccccgagtggaac
acgcgcgccgacgtggtgggccgcgccatgcggctgatcggggacgggatcgtggaccgc
gaaggggtgtcgggcctcgccgggcgcctcggctacagcccccggcaggtccagcggcag
ctcaacgccgaagtgggcgcgggccccatcgcgctcgcccgggcccagcgcggccacacc
gcccgggtgctgctccagaccaccgatctccaggccgccgagatcgccttcgccgcgggc
ttcgcgagcgtacggcagttcaacgacaccatgcgggccatctacgccgccacccccacc
gagctgcgcgccgcccgcccggcccgcccggggcggaccgcccgcttcggacccgttccc
gacgggtacggcaccgccggggtgccgctgcggctggcgcatcggagcccctgcgccacg
gaggacgtcttcgaccatctcgccctgcacgccctcgccgggatcgaggaggtcaccggg
gtgcgcggcgcccgcgtccaccgccgcaccctgcggctccccggcggtcccgccgtcgtc
gaggtcggtgaacggcccggtgggcagggctggctggagtgccgcctccacctgacggac
ctgcgcgatctgaccgcggccacccagcgtgtccgccgcctcttcgacctggacgcggac
cccggcgccgtcgccgaacggctcggcgccgatcccgcgctggccccgctggtcgccgcc
cggccggggctgcgggtgcccgggtcggccgacccggaggagaccgccgtacggatgctg
ctcgcccggcggctgaccccggcggcggcgcggcggcgcggtgaggtgctggtcgcggcc
ctggggcagcccctgtgccgggccgccgggggactgacccacctcttccccacggccgcc
gccctggccgaggccccgctcgacgggctcgggctgcccgaggagcgccgtgcggcgctg
cggaccctggccggggcgctcgccgacggctccgtccgcctggaccccggggccgaccgc
gcggaggccgcccggcggctgctcgccctgccgggcatcggcgcccgcacggccgcccgc
atccggacgcacgcgctcggcgaccccgatgtgccgctgctccaggacccggaggtacgg
gccgggctgcgccgcgccggtgcggacccggcggcggcggagcgctggcgtccgtggagc
agttacgcgatgcgctacctcaggaccgctccctga
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