Streptomyces clavuligerus: BB341_04040
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Entry
BB341_04040 CDS
T04717
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf00300
Lysine biosynthesis
sclf00470
D-Amino acid metabolism
sclf01100
Metabolic pathways
sclf01110
Biosynthesis of secondary metabolites
sclf01120
Microbial metabolism in diverse environments
sclf01230
Biosynthesis of amino acids
Module
sclf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BB341_04040
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BB341_04040
Enzymes [BR:
sclf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BB341_04040
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANW17453
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All DBs
Position
1029413..1030753
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AA seq
446 aa
AA seq
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MTVVPTLPTSLPEQLAGPSVWPAGAVLAPGGDVAVGGVPLLELAERYGTPVYVLDEAEVR
ARARAWRRALPDADVVYAAKAFLSRAVVDWMEQEGLGLDVCSAGELELAASRGFPAERIV
LHGNAKSPQDLRTALRLGVGRIVIDSEGEIARLAAQVQGPEPQQVMVRVLPGIEAGGHRK
IRTGGEGQKFGLSLANGDAEEAVARVLGQPGLELVGLHCHLGSQIASPEPYARAVRRLVA
LLARLRDRHGITLPELDLGGGFAVAYLPGDPAPAPAAYGRRIQDELIRSCAESDYPAPRL
TVEPGRSIMAPAGVALYRVLAVKRSGGRVFAAVDGGMSDNPRPALYGARYTVRRVGRVSA
APMRATTVVGRHCEAGDVLAESVELPEDLRPGDVLAVPGAGAYHVSMASGYNMTGRPPVV
AVAEGRSRVLLRRETFEDHRSRDIGL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgtccccacgctccccacgtccctgccggaacagctcgcgggcccctccgtg
tggcccgccggcgcggtgctcgcgcccggcggcgatgtggcggtgggcggtgtccccctg
ctggagctggccgaacggtacggcaccccggtctacgtcctcgacgaggccgaggtgcgc
gcccgggcccgggcctggcggcgggcactgccggacgccgacgtggtgtacgcggcgaag
gcgttcctgtcccgggccgtcgtggactggatggagcaggagggcctgggcctcgacgtc
tgctcggccggagagctggagctggcggcgagccggggcttcccggcggaacggatcgtg
ctgcacggaaacgccaagtccccgcaggacctgcggaccgcgctgcggctgggcgtgggc
cggatcgtcatcgactccgagggggagatcgcccggctggccgcacaggtccagggcccc
gaaccgcagcaggtcatggtgcgcgtgctgcccgggatcgaggcgggcggccatcggaag
atccgtaccggcggcgagggacagaagttcggactctcgctcgcgaacggggacgccgag
gaggccgtcgcccgggtgctggggcagcccggtctggaactcgtcggtctccactgccat
ctggggtcgcagatcgcctcaccggagccgtacgcccgtgcggtgcggcggctggtggcc
ctgctggcccggctccgcgaccgccacggcatcaccctgccggagctggacctcggcggc
ggtttcgccgtggcctatctgcccggggatccggcgcccgctccggcggcgtacggccgt
cgcatccaggacgaactgatccgcagctgtgccgagtccgactacccggcgccccggctg
acggtggagccgggccgctcgatcatggccccggcgggggtggcgctctaccgggtcctc
gcggtgaaacgttcgggcggccgggtgttcgccgccgtcgacggcgggatgagcgacaac
ccgcggcccgcgctctacggcgcgcggtacaccgtccgcagggtggggcgggtgtcggcg
gcgccgatgcgggcgacgacggtggtggggcggcactgcgaggcgggagatgtgctcgcc
gagtcggtggagctgccggaggatctgcggcccggtgatgtgctggcggttccgggagcg
ggcgcgtaccacgtgtcgatggcgtcgggctacaacatgacgggcaggccgccggtggtg
gcggtggccgaggggcggtcgcgggtgctgctgcggcgggagaccttcgaggaccaccgc
agccgggacatcggtctgtga
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