Streptomyces clavuligerus: BB341_06295
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Entry
BB341_06295 CDS
T04717
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB341_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_06295
Enzymes [BR:
sclf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BB341_06295
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BB341_06295
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB341_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ANW17860
UniProt:
E2Q8X9
LinkDB
All DBs
Position
complement(1638471..1639340)
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AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG
KYLWLPLADTDSSVLGHLGMSGQLLVQPEDAADEKHLRIRISFDDSLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSLISGVGNI
YADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNAALAAGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCRRCGTPMRRRPWMNRSSYFCPRCQRPSRAQRAGG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtacgccgcggactccagcgctgggtcagcggc
cggaccatcgccgaggtgcgggtgctgcacccgcgcgccgtgcgccgccatatcgcgggc
gccggtgacttcgccgcccggctcaagggccacagcgtgggcatcgcccgccgccggggc
aagtatctgtggctgccgctcgccgacaccgactcctcggtcctcggccatctcggtatg
agcggacagctcctggtgcagcccgaggacgccgccgacgagaagcacctcagaatccgg
atcagcttcgacgactccctcggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
gggctctcgctgcacgacaacacccccgacgggctgcccgacgtgatcgcgcacatcgcc
cgcgacccgctcgacccggccttcgacgacgacgccttccacgcggcgctgcgggcgaag
cgcaccaccgtcaaacgggcgctgctcgaccagtcgctgatcagcggggtcggcaatatc
tacgcggacgaggcgctgtggcgggcccggctgcactacgagcgtccgacggcgagcctg
acccggccccgctcggccgaactgctgggacatatccgggacgtcatgaacgcggcgctg
gcggcgggcggcaccagtttcgacagtctgtatgtgaatgtgaacggtgaatcggggtat
ttcgatcgttcgctggacgcctacgggcgggagggcgagccctgccgccgctgtgggacg
ccgatgcgccgccgcccgtggatgaaccggtccagctacttctgtccgcgctgccagcgc
ccgtcgcgggctcagcgcgccggaggctga
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